[ Started: 2022-11-18 01:01:40 CET ] [ CARNIVAL v2.7.2 for BioC-3.16 from https://github.com/saezlab/CARNIVAL@master ] [1] "Libraries: " "/home/omnipath/local/R/4.2-3.16" [3] "/home/omnipath/local/R/4.2" "/usr/lib/R/library" 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cloud.r-project.org Bioconductor version 3.16 (BiocManager 1.30.19), R 4.2.1 (2022-06-23) Old packages: 'BiocCheck' trying URL 'https://bioconductor.org/packages/3.16/bioc/src/contrib/BiocCheck_1.34.1.tar.gz' Content type 'application/x-gzip' length 4372069 bytes (4.2 MB) ================================================== downloaded 4.2 MB * installing *source* package ‘BiocCheck’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocCheck) The downloaded source packages are in ‘/tmp/RtmpGGDeq3/downloaded_packages’ [ Finished: 2022-11-18 01:01:53 CET ]