[ Started: 2023-09-29 23:39:17 CEST ] [ CARNIVAL v2.7.2 for BioC-3.17 from https://github.com/saezlab/CARNIVAL@master ] [1] "Libraries: " "/home/omnipath/local/R/4.3-3.17" [3] "/home/omnipath/local/R/4.3" "/opt/R-devel/lib/R/library" trying URL 'https://cran.uni-muenster.de/src/contrib/evaluate_0.22.tar.gz' Content type 'application/x-gzip' length 35644 bytes (34 KB) ================================================== downloaded 34 KB * installing *source* package ‘evaluate’ ... ** package ‘evaluate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evaluate) The downloaded source packages are in ‘/tmp/RtmpHYiXsc/downloaded_packages’ Bioconductor version 3.17 (BiocManager 1.30.22), R 4.3.0 (2023-04-21) Old packages: 'tinytex' trying URL 'https://cloud.r-project.org/src/contrib/tinytex_0.47.tar.gz' Content type 'application/x-gzip' length 33323 bytes (32 KB) ================================================== downloaded 32 KB * installing *source* package ‘tinytex’ ... ** package ‘tinytex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytex) The downloaded source packages are in ‘/tmp/RtmpHYiXsc/downloaded_packages’ Bioconductor version 3.17 (BiocManager 1.30.22), R 4.3.0 (2023-04-21) Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' Skipping 1 packages ahead of CRAN: tinytex [ Finished: 2023-09-29 23:39:28 CEST ]