[ Started: 2024-02-27 16:13:56 CET ] [ CARNIVAL v2.7.2 for BioC-3.18 from https://github.com/saezlab/CARNIVAL@master ] Get:1 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ InRelease [3,626 B] Hit:2 http://de.archive.ubuntu.com/ubuntu jammy InRelease Get:3 http://de.archive.ubuntu.com/ubuntu jammy-updates InRelease [119 kB] Hit:4 http://de.archive.ubuntu.com/ubuntu jammy-backports InRelease Get:5 http://security.ubuntu.com/ubuntu jammy-security InRelease [110 kB] Get:6 http://de.archive.ubuntu.com/ubuntu jammy-updates/main amd64 Packages [1,413 kB] Get:7 http://de.archive.ubuntu.com/ubuntu jammy-updates/main i386 Packages [576 kB] Get:8 http://de.archive.ubuntu.com/ubuntu jammy-updates/main Translation-en [277 kB] Get:9 http://de.archive.ubuntu.com/ubuntu jammy-updates/restricted amd64 Packages [1,492 kB] Get:10 http://de.archive.ubuntu.com/ubuntu jammy-updates/restricted i386 Packages [35.3 kB] Get:11 http://de.archive.ubuntu.com/ubuntu jammy-updates/restricted Translation-en [245 kB] Get:12 http://de.archive.ubuntu.com/ubuntu jammy-updates/universe amd64 Packages [1,050 kB] Get:13 http://security.ubuntu.com/ubuntu jammy-security/main i386 Packages [410 kB] Get:14 http://de.archive.ubuntu.com/ubuntu jammy-updates/universe i386 Packages [690 kB] Get:15 http://de.archive.ubuntu.com/ubuntu jammy-updates/universe Translation-en [237 kB] Get:16 http://de.archive.ubuntu.com/ubuntu jammy-updates/multiverse amd64 Packages [42.1 kB] Get:17 http://security.ubuntu.com/ubuntu jammy-security/main amd64 Packages [1,194 kB] Get:18 http://security.ubuntu.com/ubuntu jammy-security/main Translation-en [217 kB] Get:19 http://security.ubuntu.com/ubuntu jammy-security/universe amd64 Packages [845 kB] Get:20 http://security.ubuntu.com/ubuntu jammy-security/universe i386 Packages [595 kB] Get:21 http://security.ubuntu.com/ubuntu jammy-security/universe Translation-en [161 kB] Fetched 9,714 kB in 2s (5,580 kB/s) Reading package lists... [1] "Libraries: " "/home/omnipath/local/R/4.3-3.18" [3] "/home/omnipath/local/R/4.3" "/usr/lib/R/library" /usr/local/bin/curl: symbol lookup error: /usr/local/bin/curl: undefined symbol: curl_easy_header Error in system2(curl, args = c("--silent", "--data-binary", shQuote(paste0("@", : error in running command Calls: sapply -> lapply -> system_requirements -> system2 Execution halted [ Finished: 2024-02-27 16:14:06 CET ]