[ Started: 2026-04-07 20:24:12 CEST ] [ CARNIVAL v2.5.1 for BioC-3.23 from https://github.com/saezlab/CARNIVAL@dev (81a0120 2022-03-17 09:59:10) ] [1] "Libraries: " "/home/omnipath/local/R/4.6-3.23" [3] "/home/omnipath/local/R/4.6" "/opt/R-devel/lib/R/library" Bioconductor version 3.23 (BiocManager 1.30.27), R Under development (unstable) (2026-03-23 r89685) Old packages: 'GSVA', 'igraph', 'scater', 'wppi' trying URL 'https://bioconductor.org/packages/3.23/bioc/src/contrib/GSVA_2.5.22.tar.gz' trying URL 'https://cloud.r-project.org/src/contrib/igraph_2.2.3.tar.gz' trying URL 'https://bioconductor.org/packages/3.23/bioc/src/contrib/scater_1.39.4.tar.gz' trying URL 'https://bioconductor.org/packages/3.23/bioc/src/contrib/wppi_1.19.0.tar.gz' * installing *source* package ‘GSVA’ ... ** this is package ‘GSVA’ version ‘2.5.22’ ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c ecdfvals.c -o ecdfvals.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c kcdfvals.c -o kcdfvals.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c kernel_estimation.c -o kernel_estimation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c ks_test.c -o ks_test.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c register_cmethods.c -o register_cmethods.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c row_rngs_nzrngs.c -o row_rngs_nzrngs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.6-3.23/cli/include' -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o gcc -std=gnu2x -shared -L/usr/local/lib -o GSVA.so ecdfvals.o kcdfvals.o kernel_estimation.o ks_test.o register_cmethods.o row_rngs_nzrngs.o utils.o installing to /home/omnipath/local/R/4.6-3.23/00LOCK-GSVA/00new/GSVA/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GSVA) * installing *source* package ‘igraph’ ... ** this is package ‘igraph’ version ‘2.2.3’ ** package ‘igraph’ successfully unpacked and MD5 sums checked ** using staged installation libxml2 include directories: -I/usr/include/libxml2 libxml2 library link flags: -lxml2 Using installed GLPK ** libs using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dgetv0.f -o vendor/arpack/dgetv0.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dlaqrb.f -o vendor/arpack/dlaqrb.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dmout.f -o vendor/arpack/dmout.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnaitr.f -o vendor/arpack/dnaitr.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnapps.f -o vendor/arpack/dnapps.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnaup2.f -o vendor/arpack/dnaup2.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnaupd.f -o vendor/arpack/dnaupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnconv.f -o vendor/arpack/dnconv.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dneigh.f -o vendor/arpack/dneigh.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dneupd.f -o vendor/arpack/dneupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dngets.f -o vendor/arpack/dngets.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsaitr.f -o vendor/arpack/dsaitr.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsapps.f -o vendor/arpack/dsapps.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsaup2.f -o vendor/arpack/dsaup2.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsaupd.f -o vendor/arpack/dsaupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsconv.f -o vendor/arpack/dsconv.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dseigt.f -o vendor/arpack/dseigt.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsesrt.f -o vendor/arpack/dsesrt.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dseupd.f -o vendor/arpack/dseupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsgets.f -o vendor/arpack/dsgets.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsortc.f -o vendor/arpack/dsortc.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsortr.f -o vendor/arpack/dsortr.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dstatn.f -o vendor/arpack/dstatn.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dstats.f -o vendor/arpack/dstats.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dstqrb.f -o vendor/arpack/dstqrb.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dvout.f -o vendor/arpack/dvout.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/ivout.f -o vendor/arpack/ivout.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/second.f -o vendor/arpack/second.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/wrap.f -o vendor/arpack/wrap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/betweenness.c -o vendor/cigraph/src/centrality/betweenness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/centrality_other.c -o vendor/cigraph/src/centrality/centrality_other.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/centralization.c -o vendor/cigraph/src/centrality/centralization.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/closeness.c -o vendor/cigraph/src/centrality/closeness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/coreness.c -o vendor/cigraph/src/centrality/coreness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/eigenvector.c -o vendor/cigraph/src/centrality/eigenvector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/hub_authority.c -o vendor/cigraph/src/centrality/hub_authority.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/pagerank.c -o vendor/cigraph/src/centrality/pagerank.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack.cpp -o vendor/cigraph/src/centrality/prpack.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_base_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_result.cpp -o vendor/cigraph/src/centrality/prpack/prpack_result.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_solver.cpp -o vendor/cigraph/src/centrality/prpack/prpack_solver.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_utils.cpp -o vendor/cigraph/src/centrality/prpack/prpack_utils.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/truss.cpp -o vendor/cigraph/src/centrality/truss.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer/cliquer.c -o vendor/cigraph/src/cliques/cliquer/cliquer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer/cliquer_graph.c -o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer/reorder.c -o vendor/cigraph/src/cliques/cliquer/reorder.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer_wrapper.c -o vendor/cigraph/src/cliques/cliquer_wrapper.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliques.c -o vendor/cigraph/src/cliques/cliques.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/glet.c -o vendor/cigraph/src/cliques/glet.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/maximal_cliques.c -o vendor/cigraph/src/cliques/maximal_cliques.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/community_misc.c -o vendor/cigraph/src/community/community_misc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/edge_betweenness.c -o vendor/cigraph/src/community/edge_betweenness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/fast_modularity.c -o vendor/cigraph/src/community/fast_modularity.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/fluid.c -o vendor/cigraph/src/community/fluid.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/infomap/infomap.cc -o vendor/cigraph/src/community/infomap/infomap.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/infomap/infomap_FlowGraph.cc -o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/infomap/infomap_Greedy.cc -o vendor/cigraph/src/community/infomap/infomap_Greedy.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/label_propagation.c -o vendor/cigraph/src/community/label_propagation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/leading_eigenvector.c -o vendor/cigraph/src/community/leading_eigenvector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/leiden.c -o vendor/cigraph/src/community/leiden.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/louvain.c -o vendor/cigraph/src/community/louvain.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/modularity.c -o vendor/cigraph/src/community/modularity.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/optimal_modularity.c -o vendor/cigraph/src/community/optimal_modularity.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/NetDataTypes.cpp -o vendor/cigraph/src/community/spinglass/NetDataTypes.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/NetRoutines.cpp -o vendor/cigraph/src/community/spinglass/NetRoutines.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/clustertool.cpp -o vendor/cigraph/src/community/spinglass/clustertool.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/pottsmodel_2.cpp -o vendor/cigraph/src/community/spinglass/pottsmodel_2.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/voronoi.c -o vendor/cigraph/src/community/voronoi.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap.cpp -o vendor/cigraph/src/community/walktrap/walktrap.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap_communities.cpp -o vendor/cigraph/src/community/walktrap/walktrap_communities.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap_graph.cpp -o vendor/cigraph/src/community/walktrap/walktrap_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap_heap.cpp -o vendor/cigraph/src/community/walktrap/walktrap_heap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/cohesive_blocks.c -o vendor/cigraph/src/connectivity/cohesive_blocks.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/components.c -o vendor/cigraph/src/connectivity/components.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/percolation.c -o vendor/cigraph/src/connectivity/percolation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/reachability.c -o vendor/cigraph/src/connectivity/reachability.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/separators.c -o vendor/cigraph/src/connectivity/separators.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/adjacency.c -o vendor/cigraph/src/constructors/adjacency.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/atlas.c -o vendor/cigraph/src/constructors/atlas.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/basic_constructors.c -o vendor/cigraph/src/constructors/basic_constructors.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/circulant.c -o vendor/cigraph/src/constructors/circulant.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/de_bruijn.c -o vendor/cigraph/src/constructors/de_bruijn.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/famous.c -o vendor/cigraph/src/constructors/famous.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/full.c -o vendor/cigraph/src/constructors/full.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/generalized_petersen.c -o vendor/cigraph/src/constructors/generalized_petersen.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/kautz.c -o vendor/cigraph/src/constructors/kautz.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/lattices.c -o vendor/cigraph/src/constructors/lattices.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/lcf.c -o vendor/cigraph/src/constructors/lcf.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/linegraph.c -o vendor/cigraph/src/constructors/linegraph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/mycielskian.c -o vendor/cigraph/src/constructors/mycielskian.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/prufer.c -o vendor/cigraph/src/constructors/prufer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/regular.c -o vendor/cigraph/src/constructors/regular.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/trees.c -o vendor/cigraph/src/constructors/trees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/array.c -o vendor/cigraph/src/core/array.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/bitset.c -o vendor/cigraph/src/core/bitset.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/bitset_list.c -o vendor/cigraph/src/core/bitset_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/buckets.c -o vendor/cigraph/src/core/buckets.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/cutheap.c -o vendor/cigraph/src/core/cutheap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/dqueue.c -o vendor/cigraph/src/core/dqueue.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/error.c -o vendor/cigraph/src/core/error.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/estack.c -o vendor/cigraph/src/core/estack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/fixed_vectorlist.c -o vendor/cigraph/src/core/fixed_vectorlist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/genheap.c -o vendor/cigraph/src/core/genheap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/grid.c -o vendor/cigraph/src/core/grid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/heap.c -o vendor/cigraph/src/core/heap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/indheap.c -o vendor/cigraph/src/core/indheap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/interruption.c -o vendor/cigraph/src/core/interruption.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/marked_queue.c -o vendor/cigraph/src/core/marked_queue.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/matrix.c -o vendor/cigraph/src/core/matrix.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/matrix_list.c -o vendor/cigraph/src/core/matrix_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/memory.c -o vendor/cigraph/src/core/memory.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/printing.c -o vendor/cigraph/src/core/printing.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/progress.c -o vendor/cigraph/src/core/progress.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/psumtree.c -o vendor/cigraph/src/core/psumtree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/set.c -o vendor/cigraph/src/core/set.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/sparsemat.c -o vendor/cigraph/src/core/sparsemat.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/stack.c -o vendor/cigraph/src/core/stack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/statusbar.c -o vendor/cigraph/src/core/statusbar.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/strvector.c -o vendor/cigraph/src/core/strvector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/trie.c -o vendor/cigraph/src/core/trie.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/vector.c -o vendor/cigraph/src/core/vector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/vector_list.c -o vendor/cigraph/src/core/vector_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/vector_ptr.c -o vendor/cigraph/src/core/vector_ptr.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cycles/simple_cycles.c -o vendor/cigraph/src/cycles/simple_cycles.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/flow/flow.c -o vendor/cigraph/src/flow/flow.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/flow/flow_conversion.c -o vendor/cigraph/src/flow/flow_conversion.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/flow/st-cuts.c -o vendor/cigraph/src/flow/st-cuts.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/barabasi.c -o vendor/cigraph/src/games/barabasi.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/callaway_traits.c -o vendor/cigraph/src/games/callaway_traits.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/chung_lu.c -o vendor/cigraph/src/games/chung_lu.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/citations.c -o vendor/cigraph/src/games/citations.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/correlated.c -o vendor/cigraph/src/games/correlated.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence.c -o vendor/cigraph/src/games/degree_sequence.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/dotproduct.c -o vendor/cigraph/src/games/dotproduct.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/erdos_renyi.c -o vendor/cigraph/src/games/erdos_renyi.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/establishment.c -o vendor/cigraph/src/games/establishment.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/forestfire.c -o vendor/cigraph/src/games/forestfire.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/grg.c -o vendor/cigraph/src/games/grg.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/growing_random.c -o vendor/cigraph/src/games/growing_random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/islands.c -o vendor/cigraph/src/games/islands.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/k_regular.c -o vendor/cigraph/src/games/k_regular.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/preference.c -o vendor/cigraph/src/games/preference.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/recent_degree.c -o vendor/cigraph/src/games/recent_degree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/sbm.c -o vendor/cigraph/src/games/sbm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/static_fitness.c -o vendor/cigraph/src/games/static_fitness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/tree.c -o vendor/cigraph/src/games/tree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/watts_strogatz.c -o vendor/cigraph/src/games/watts_strogatz.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/adjlist.c -o vendor/cigraph/src/graph/adjlist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/attributes.c -o vendor/cigraph/src/graph/attributes.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/basic_query.c -o vendor/cigraph/src/graph/basic_query.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/caching.c -o vendor/cigraph/src/graph/caching.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/cattributes.c -o vendor/cigraph/src/graph/cattributes.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/graph_list.c -o vendor/cigraph/src/graph/graph_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/iterators.c -o vendor/cigraph/src/graph/iterators.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/type_common.c -o vendor/cigraph/src/graph/type_common.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/type_indexededgelist.c -o vendor/cigraph/src/graph/type_indexededgelist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/visitors.c -o vendor/cigraph/src/graph/visitors.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/hrg/hrg.cc -o vendor/cigraph/src/hrg/hrg.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/hrg/hrg_types.cc -o vendor/cigraph/src/hrg/hrg_types.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/glpk_support.c -o vendor/cigraph/src/internal/glpk_support.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/hacks.c -o vendor/cigraph/src/internal/hacks.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/lsap.c -o vendor/cigraph/src/internal/lsap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/qsort.c -o vendor/cigraph/src/internal/qsort.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/qsort_r.c -o vendor/cigraph/src/internal/qsort_r.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/utils.c -o vendor/cigraph/src/internal/utils.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/zeroin.c -o vendor/cigraph/src/internal/zeroin.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/dimacs.c -o vendor/cigraph/src/io/dimacs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/dl.c -o vendor/cigraph/src/io/dl.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/dot.c -o vendor/cigraph/src/io/dot.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/edgelist.c -o vendor/cigraph/src/io/edgelist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/gml-tree.c -o vendor/cigraph/src/io/gml-tree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/gml.c -o vendor/cigraph/src/io/gml.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/graphdb.c -o vendor/cigraph/src/io/graphdb.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/graphml.c -o vendor/cigraph/src/io/graphml.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/leda.c -o vendor/cigraph/src/io/leda.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/lgl.c -o vendor/cigraph/src/io/lgl.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/ncol.c -o vendor/cigraph/src/io/ncol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/pajek.c -o vendor/cigraph/src/io/pajek.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/parse_utils.c -o vendor/cigraph/src/io/parse_utils.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss.cc -o vendor/cigraph/src/isomorphism/bliss.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/defs.cc -o vendor/cigraph/src/isomorphism/bliss/defs.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/graph.cc -o vendor/cigraph/src/isomorphism/bliss/graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/heap.cc -o vendor/cigraph/src/isomorphism/bliss/heap.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/orbit.cc -o vendor/cigraph/src/isomorphism/bliss/orbit.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/partition.cc -o vendor/cigraph/src/isomorphism/bliss/partition.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/uintseqhash.cc -o vendor/cigraph/src/isomorphism/bliss/uintseqhash.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/utils.cc -o vendor/cigraph/src/isomorphism/bliss/utils.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/isoclasses.c -o vendor/cigraph/src/isomorphism/isoclasses.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/isomorphism_misc.c -o vendor/cigraph/src/isomorphism/isomorphism_misc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/lad.c -o vendor/cigraph/src/isomorphism/lad.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/queries.c -o vendor/cigraph/src/isomorphism/queries.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/vf2.c -o vendor/cigraph/src/isomorphism/vf2.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/align.c -o vendor/cigraph/src/layout/align.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/circular.c -o vendor/cigraph/src/layout/circular.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/davidson_harel.c -o vendor/cigraph/src/layout/davidson_harel.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/DensityGrid.cpp -o vendor/cigraph/src/layout/drl/DensityGrid.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/DensityGrid_3d.cpp -o vendor/cigraph/src/layout/drl/DensityGrid_3d.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_graph.cpp -o vendor/cigraph/src/layout/drl/drl_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_graph_3d.cpp -o vendor/cigraph/src/layout/drl/drl_graph_3d.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_layout.cpp -o vendor/cigraph/src/layout/drl/drl_layout.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_layout_3d.cpp -o vendor/cigraph/src/layout/drl/drl_layout_3d.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_parse.cpp -o vendor/cigraph/src/layout/drl/drl_parse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/fruchterman_reingold.c -o vendor/cigraph/src/layout/fruchterman_reingold.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/gem.c -o vendor/cigraph/src/layout/gem.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/graphopt.c -o vendor/cigraph/src/layout/graphopt.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/kamada_kawai.c -o vendor/cigraph/src/layout/kamada_kawai.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/large_graph.c -o vendor/cigraph/src/layout/large_graph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/layout_bipartite.c -o vendor/cigraph/src/layout/layout_bipartite.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/layout_grid.c -o vendor/cigraph/src/layout/layout_grid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/layout_random.c -o vendor/cigraph/src/layout/layout_random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/mds.c -o vendor/cigraph/src/layout/mds.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/merge_dla.c -o vendor/cigraph/src/layout/merge_dla.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/merge_grid.c -o vendor/cigraph/src/layout/merge_grid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/reingold_tilford.c -o vendor/cigraph/src/layout/reingold_tilford.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/sugiyama.c -o vendor/cigraph/src/layout/sugiyama.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/umap.c -o vendor/cigraph/src/layout/umap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/arpack.c -o vendor/cigraph/src/linalg/arpack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/blas.c -o vendor/cigraph/src/linalg/blas.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/eigen.c -o vendor/cigraph/src/linalg/eigen.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/lapack.c -o vendor/cigraph/src/linalg/lapack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/math/complex.c -o vendor/cigraph/src/math/complex.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/math/safe_intop.c -o vendor/cigraph/src/math/safe_intop.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/math/utils.c -o vendor/cigraph/src/math/utils.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/bipartite.c -o vendor/cigraph/src/misc/bipartite.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/chordality.c -o vendor/cigraph/src/misc/chordality.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/cocitation.c -o vendor/cigraph/src/misc/cocitation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/coloring.c -o vendor/cigraph/src/misc/coloring.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/conversion.c -o vendor/cigraph/src/misc/conversion.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/cycle_bases.c -o vendor/cigraph/src/misc/cycle_bases.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/degree_sequence.cpp -o vendor/cigraph/src/misc/degree_sequence.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/embedding.c -o vendor/cigraph/src/misc/embedding.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/feedback_arc_set.c -o vendor/cigraph/src/misc/feedback_arc_set.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/graphicality.c -o vendor/cigraph/src/misc/graphicality.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/matching.c -o vendor/cigraph/src/misc/matching.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/microscopic_update.c -o vendor/cigraph/src/misc/microscopic_update.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/mixing.c -o vendor/cigraph/src/misc/mixing.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/motifs.c -o vendor/cigraph/src/misc/motifs.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/order_cycle.cpp -o vendor/cigraph/src/misc/order_cycle.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/other.c -o vendor/cigraph/src/misc/other.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/power_law_fit.c -o vendor/cigraph/src/misc/power_law_fit.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/scan.c -o vendor/cigraph/src/misc/scan.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/sir.c -o vendor/cigraph/src/misc/sir.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/spanning_trees.c -o vendor/cigraph/src/misc/spanning_trees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/add_edge.c -o vendor/cigraph/src/operators/add_edge.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/complementer.c -o vendor/cigraph/src/operators/complementer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/compose.c -o vendor/cigraph/src/operators/compose.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/connect_neighborhood.c -o vendor/cigraph/src/operators/connect_neighborhood.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/contract.c -o vendor/cigraph/src/operators/contract.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/difference.c -o vendor/cigraph/src/operators/difference.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/disjoint_union.c -o vendor/cigraph/src/operators/disjoint_union.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/intersection.c -o vendor/cigraph/src/operators/intersection.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/join.c -o vendor/cigraph/src/operators/join.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/misc_internal.c -o vendor/cigraph/src/operators/misc_internal.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/permute.c -o vendor/cigraph/src/operators/permute.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/products.c -o vendor/cigraph/src/operators/products.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/reverse.c -o vendor/cigraph/src/operators/reverse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/rewire.c -o vendor/cigraph/src/operators/rewire.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/rewire_edges.c -o vendor/cigraph/src/operators/rewire_edges.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/simplify.c -o vendor/cigraph/src/operators/simplify.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/subgraph.c -o vendor/cigraph/src/operators/subgraph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/union.c -o vendor/cigraph/src/operators/union.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/all_shortest_paths.c -o vendor/cigraph/src/paths/all_shortest_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/astar.c -o vendor/cigraph/src/paths/astar.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/bellman_ford.c -o vendor/cigraph/src/paths/bellman_ford.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/dijkstra.c -o vendor/cigraph/src/paths/dijkstra.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/distances.c -o vendor/cigraph/src/paths/distances.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/eulerian.c -o vendor/cigraph/src/paths/eulerian.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/floyd_warshall.c -o vendor/cigraph/src/paths/floyd_warshall.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/histogram.c -o vendor/cigraph/src/paths/histogram.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/johnson.c -o vendor/cigraph/src/paths/johnson.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/random_walk.c -o vendor/cigraph/src/paths/random_walk.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/shortest_paths.c -o vendor/cigraph/src/paths/shortest_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/simple_paths.c -o vendor/cigraph/src/paths/simple_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/sparsifier.c -o vendor/cigraph/src/paths/sparsifier.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/unweighted.c -o vendor/cigraph/src/paths/unweighted.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/voronoi.c -o vendor/cigraph/src/paths/voronoi.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/widest_paths.c -o vendor/cigraph/src/paths/widest_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/basic_properties.c -o vendor/cigraph/src/properties/basic_properties.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/complete.c -o vendor/cigraph/src/properties/complete.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/constraint.c -o vendor/cigraph/src/properties/constraint.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/convergence_degree.c -o vendor/cigraph/src/properties/convergence_degree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/dag.c -o vendor/cigraph/src/properties/dag.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/degrees.c -o vendor/cigraph/src/properties/degrees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/ecc.c -o vendor/cigraph/src/properties/ecc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/girth.c -o vendor/cigraph/src/properties/girth.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/loops.c -o vendor/cigraph/src/properties/loops.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/multiplicity.c -o vendor/cigraph/src/properties/multiplicity.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/neighborhood.c -o vendor/cigraph/src/properties/neighborhood.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/perfect.c -o vendor/cigraph/src/properties/perfect.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/rich_club.c -o vendor/cigraph/src/properties/rich_club.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/spectral.c -o vendor/cigraph/src/properties/spectral.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/trees.c -o vendor/cigraph/src/properties/trees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/triangles.c -o vendor/cigraph/src/properties/triangles.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/random.c -o vendor/cigraph/src/random/random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_glibc2.c -o vendor/cigraph/src/random/rng_glibc2.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_mt19937.c -o vendor/cigraph/src/random/rng_mt19937.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_pcg32.c -o vendor/cigraph/src/random/rng_pcg32.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_pcg64.c -o vendor/cigraph/src/random/rng_pcg64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/version.c -o vendor/cigraph/src/version.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_add.c -o vendor/cigraph/vendor/cs/cs_add.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_amd.c -o vendor/cigraph/vendor/cs/cs_amd.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_chol.c -o vendor/cigraph/vendor/cs/cs_chol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_cholsol.c -o vendor/cigraph/vendor/cs/cs_cholsol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_compress.c -o vendor/cigraph/vendor/cs/cs_compress.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_counts.c -o vendor/cigraph/vendor/cs/cs_counts.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_cumsum.c -o vendor/cigraph/vendor/cs/cs_cumsum.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dfs.c -o vendor/cigraph/vendor/cs/cs_dfs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dmperm.c -o vendor/cigraph/vendor/cs/cs_dmperm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_droptol.c -o vendor/cigraph/vendor/cs/cs_droptol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dropzeros.c -o vendor/cigraph/vendor/cs/cs_dropzeros.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dupl.c -o vendor/cigraph/vendor/cs/cs_dupl.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_entry.c -o vendor/cigraph/vendor/cs/cs_entry.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_ereach.c -o vendor/cigraph/vendor/cs/cs_ereach.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_etree.c -o vendor/cigraph/vendor/cs/cs_etree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_fkeep.c -o vendor/cigraph/vendor/cs/cs_fkeep.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_gaxpy.c -o vendor/cigraph/vendor/cs/cs_gaxpy.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_happly.c -o vendor/cigraph/vendor/cs/cs_happly.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_house.c -o vendor/cigraph/vendor/cs/cs_house.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_ipvec.c -o vendor/cigraph/vendor/cs/cs_ipvec.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_leaf.c -o vendor/cigraph/vendor/cs/cs_leaf.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_load.c -o vendor/cigraph/vendor/cs/cs_load.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_lsolve.c -o vendor/cigraph/vendor/cs/cs_lsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_ltsolve.c -o vendor/cigraph/vendor/cs/cs_ltsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_lu.c -o vendor/cigraph/vendor/cs/cs_lu.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_lusol.c -o vendor/cigraph/vendor/cs/cs_lusol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_malloc.c -o vendor/cigraph/vendor/cs/cs_malloc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_maxtrans.c -o vendor/cigraph/vendor/cs/cs_maxtrans.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_multiply.c -o vendor/cigraph/vendor/cs/cs_multiply.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_norm.c -o vendor/cigraph/vendor/cs/cs_norm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_permute.c -o vendor/cigraph/vendor/cs/cs_permute.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_pinv.c -o vendor/cigraph/vendor/cs/cs_pinv.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_post.c -o vendor/cigraph/vendor/cs/cs_post.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_print.c -o vendor/cigraph/vendor/cs/cs_print.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_pvec.c -o vendor/cigraph/vendor/cs/cs_pvec.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_qr.c -o vendor/cigraph/vendor/cs/cs_qr.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_qrsol.c -o vendor/cigraph/vendor/cs/cs_qrsol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_randperm.c -o vendor/cigraph/vendor/cs/cs_randperm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_reach.c -o vendor/cigraph/vendor/cs/cs_reach.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_scatter.c -o vendor/cigraph/vendor/cs/cs_scatter.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_scc.c -o vendor/cigraph/vendor/cs/cs_scc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_schol.c -o vendor/cigraph/vendor/cs/cs_schol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_spsolve.c -o vendor/cigraph/vendor/cs/cs_spsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_sqr.c -o vendor/cigraph/vendor/cs/cs_sqr.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_symperm.c -o vendor/cigraph/vendor/cs/cs_symperm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_tdfs.c -o vendor/cigraph/vendor/cs/cs_tdfs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_transpose.c -o vendor/cigraph/vendor/cs/cs_transpose.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_updown.c -o vendor/cigraph/vendor/cs/cs_updown.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_usolve.c -o vendor/cigraph/vendor/cs/cs_usolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_util.c -o vendor/cigraph/vendor/cs/cs_util.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_utsolve.c -o vendor/cigraph/vendor/cs/cs_utsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-advance-128.c -o vendor/cigraph/vendor/pcg/pcg-advance-128.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-advance-64.c -o vendor/cigraph/vendor/pcg/pcg-advance-64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-output-128.c -o vendor/cigraph/vendor/pcg/pcg-output-128.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-output-32.c -o vendor/cigraph/vendor/pcg/pcg-output-32.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-output-64.c -o vendor/cigraph/vendor/pcg/pcg-output-64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-rngs-128.c -o vendor/cigraph/vendor/pcg/pcg-rngs-128.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-rngs-64.c -o vendor/cigraph/vendor/pcg/pcg-rngs-64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/gss.c -o vendor/cigraph/vendor/plfit/gss.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/hzeta.c -o vendor/cigraph/vendor/plfit/hzeta.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/kolmogorov.c -o vendor/cigraph/vendor/plfit/kolmogorov.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/lbfgs.c -o vendor/cigraph/vendor/plfit/lbfgs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/mt.c -o vendor/cigraph/vendor/plfit/mt.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/options.c -o vendor/cigraph/vendor/plfit/options.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/plfit.c -o vendor/cigraph/vendor/plfit/plfit.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/plfit_error.c -o vendor/cigraph/vendor/plfit/plfit_error.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/rbinom.c -o vendor/cigraph/vendor/plfit/rbinom.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/sampling.c -o vendor/cigraph/vendor/plfit/sampling.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/dl-lexer.c -o vendor/io/dl-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/dl-parser.c -o vendor/io/dl-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/gml-lexer.c -o vendor/io/gml-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/gml-parser.c -o vendor/io/gml-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/lgl-lexer.c -o vendor/io/lgl-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/lgl-parser.c -o vendor/io/lgl-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/ncol-lexer.c -o vendor/io/ncol-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/ncol-parser.c -o vendor/io/ncol-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/pajek-lexer.c -o vendor/io/pajek-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/pajek-parser.c -o vendor/io/pajek-parser.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Color.cpp -o vendor/simpleraytracer/Color.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Light.cpp -o vendor/simpleraytracer/Light.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Point.cpp -o vendor/simpleraytracer/Point.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Ray.cpp -o vendor/simpleraytracer/Ray.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/RayTracer.cpp -o vendor/simpleraytracer/RayTracer.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/RayVector.cpp -o vendor/simpleraytracer/RayVector.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Shape.cpp -o vendor/simpleraytracer/Shape.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Sphere.cpp -o vendor/simpleraytracer/Sphere.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Triangle.cpp -o vendor/simpleraytracer/Triangle.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/unit_limiter.cpp -o vendor/simpleraytracer/unit_limiter.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/clear.c -o vendor/uuid/clear.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/compare.c -o vendor/uuid/compare.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/copy.c -o vendor/uuid/copy.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/gen_uuid.c -o vendor/uuid/gen_uuid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/isnull.c -o vendor/uuid/isnull.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/pack.c -o vendor/uuid/pack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/parse.c -o vendor/uuid/parse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/unpack.c -o vendor/uuid/unpack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/unparse.c -o vendor/uuid/unparse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rinterface.c -o rinterface.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rinterface_extra.c -o rinterface_extra.o rinterface_extra.c: In function ‘R_igraph_progress_handler’: rinterface_extra.c:2387:9: warning: implicit declaration of function ‘R_getRegisteredNamespace’ [-Wimplicit-function-declaration] 2387 | rho = R_getRegisteredNamespace("igraph"); | ^~~~~~~~~~~~~~~~~~~~~~~~ rinterface_extra.c:2387:7: warning: assignment to ‘SEXP’ {aka ‘struct SEXPREC *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2387 | rho = R_getRegisteredNamespace("igraph"); | ^ rinterface_extra.c: In function ‘R_igraph_status_handler’: rinterface_extra.c:2410:7: warning: assignment to ‘SEXP’ {aka ‘struct SEXPREC *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2410 | rho = R_getRegisteredNamespace("igraph"); | ^ rinterface_extra.c: In function ‘R_igraph_finalizer’: rinterface_extra.c:2514:7: warning: assignment to ‘SEXP’ {aka ‘struct SEXPREC *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2514 | rho = R_getRegisteredNamespace("igraph"); | ^ gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rrandom.c -o rrandom.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c uuid.c -o uuid.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cpp11.cpp -o cpp11.o In file included from /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11.hpp:3, from /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11/declarations.hpp:13, from cpp11.cpp:5: /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11/R.hpp: In function ‘SEXPREC* cpp11::detail::r_ns_env(const char*)’: /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11/R.hpp:128:10: error: ‘R_getRegisteredNamespace’ was not declared in this scope 128 | return R_getRegisteredNamespace(name); | ^~~~~~~~~~~~~~~~~~~~~~~~ make: *** [/opt/R-devel/lib/R/etc/Makeconf:199: cpp11.o] Error 1 ERROR: compilation failed for package ‘igraph’ * removing ‘/home/omnipath/local/R/4.6-3.23/igraph’ * restoring previous ‘/home/omnipath/local/R/4.6-3.23/igraph’ * installing *source* package ‘scater’ ... ** this is package ‘scater’ version ‘1.39.4’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scater) * installing *source* package ‘wppi’ ... ** this is package ‘wppi’ version ‘1.19.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading [2026-04-07 20:27:13] [INFO] [OmnipathR] Setting up new cache directory `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:13] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/.cache/OmnipathR/cache.json` (encoding: UTF-8). [2026-04-07 20:27:13] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:13] [INFO] [OmnipathR] Initialized cache: `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:13] [INFO] [OmnipathR] Package `OmnipathR` packaged: 2026-04-06 19:48:21 UTC; omnipath [2026-04-07 20:27:13] [INFO] [OmnipathR] Package `OmnipathR` date/publication: NA [2026-04-07 20:27:13] [INFO] [OmnipathR] Package `OmnipathR` built: R 4.6.0; ; 2026-04-06 19:48:23 UTC; unix [2026-04-07 20:27:13] [INFO] [OmnipathR] Package `OmnipathR` version: 3.19.11 [2026-04-07 20:27:13] [INFO] [OmnipathR] Package `OmnipathR` repository: NA [2026-04-07 20:27:14] [INFO] [OmnipathR] Session info: [version=R Under development (unstable) (2026-03-23 r89685); os=Ubuntu 24.04.2 LTS; system=x86_64, linux-gnu; ui=X11; language=en_GB; collate=C; ctype=en_GB.UTF-8; tz=Europe/Berlin; date=2026-04-07; pandoc=3.1.3 @ /usr/bin/ (via rmarkdown); quarto=NA] [2026-04-07 20:27:14] [INFO] [OmnipathR] External libraries: [cairo=1.18.0; cairoFT=2.13.2/2.15.0; pango=; png=1.6.43; jpeg=8.0; tiff=LIBTIFF, Version 4.5.1; tcl=8.6; curl=8.5.0; zlib=1.3; bzlib=1.0.8, 13-Jul-2019; xz=5.4.5; deflate=1.19; zstd=1.5.5; PCRE=10.42 2022-12-11; ICU=74.2; TRE=TRE 0.8.0 R_fixes (BSD); iconv=glibc 2.39; readline=8.2; BLAS=/opt/R-devel/lib/R/lib/libRblas.so; lapack=/usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.12.0; lapack_version=3.12.0] [2026-04-07 20:27:14] [INFO] [OmnipathR] Loaded packages: backports 1.5.1(2026-04-03); bit 4.6.0(2025-03-06); bit64 4.6.0-1(2025-01-16); blob 1.3.0(2026-01-14); cachem 1.1.0(2024-05-16); cellranger 1.1.0(2016-07-27); checkmate 2.3.4(2026-02-03); cli 3.6.5(2025-04-23); crayon 1.5.3(2024-06-20); curl 7.0.0(2025-08-19); DBI 1.3.0(2026-02-25); digest 0.6.39(2025-11-19); dplyr 1.2.1(2026-04-03); evaluate 1.0.5(2025-08-27); fastmap 1.2.0(2024-05-15); fs 2.0.1(2026-03-24); generics 0.1.4(2025-05-09); glue 1.8.0(2024-09-30); hms 1.1.4(2025-10-17); htmltools 0.5.9(2025-12-04); httr 1.4.8(2026-02-13); httr2 1.2.2(2025-12-08); igraph 2.2.2(2026-02-12); jsonlite 2.0.0(2025-03-27); knitr 1.51(2025-12-20); later 1.4.8(2026-03-05); lattice 0.22-9(2026-02-09); lifecycle 1.0.5(2026-01-08); logger 0.4.1(2025-09-11); lubridate 1.9.5(2026-02-04); magrittr 2.0.5(2026-04-04); Matrix 1.7-5(2026-03-21); memoise 2.0.1(2021-11-26); OmnipathR 3.19.11(2026-04-06); otel 0.2.0(2025-08-29); pillar 1.11.1(2025-09-17); pkgconfig 2.0.3(2019-09-22); prettyunits 1.2.0(2023-09-24); progress 1.2.3(2023-12-06); purrr 1.2.1(2026-01-09); R.methodsS3 1.8.2(2022-06-13); R.oo 1.27.1(2025-05-02); R.utils 2.13.0(2025-02-24); R6 2.6.1(2025-02-15); rappdirs 0.3.4(2026-01-17); Rcpp 1.1.1(2026-01-10); readr 2.2.0(2026-02-19); readxl 1.4.5(2025-03-07); rlang 1.2.0(2026-04-06); rmarkdown 2.31(2026-03-26); RSQLite 2.4.6(2026-02-06); rvest 1.0.5(2025-08-29); sessioninfo 1.2.3(2025-02-05); stringi 1.8.7(2025-03-27); stringr 1.6.0(2025-11-04); tibble 3.3.1(2026-01-11); tidyr 1.3.2(2025-12-19); tidyselect 1.2.1(2024-03-11); timechange 0.4.0(2026-01-29); tzdb 0.5.0(2025-03-15); vctrs 0.7.2(2026-03-21); withr 3.0.2(2024-10-28); wppi 1.19.0(2025-11-18); xfun 0.57(2026-03-20); XML 3.99-0.23(2026-03-20); xml2 1.5.2(2026-01-17); yaml 2.3.12(2025-12-10); zip 2.3.3(2025-05-13) [2026-04-07 20:27:14] [INFO] [OmnipathR] CURL: version: 8.5.0; headers: 8.5.0; ssl_version: OpenSSL/3.0.13; libz_version: 1.3; libssh_version: libssh/0.10.6/openssl/zlib; libidn_version: 2.3.7; host: x86_64-pc-linux-gnu; protocols: dict, file, ftp, ftps, gopher, gophers, http, https, imap, imaps, ldap, ldaps, mqtt, pop3, pop3s, rtmp, rtmpe, rtmps, rtmpt, rtmpte, rtmpts, rtsp, scp, sftp, smb, smbs, smtp, smtps, telnet, tftp; ipv6: TRUE; http2: TRUE; idn: TRUE; url_parser: TRUE [2026-04-07 20:27:14] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2026-04-07 20:27:14] [TRACE] [OmnipathR] Cache is at `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:14] [TRACE] [OmnipathR] Contains 1 files. [2026-04-07 20:27:14] [TRACE] [OmnipathR] Cache is locked: FALSE. [2026-04-07 20:27:14] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/.cache/OmnipathR/cache.json` (encoding: UTF-8). [2026-04-07 20:27:14] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:14] [SUCCESS] [OmnipathR] Removing all cache contents from `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:14] [TRACE] [OmnipathR] Pandoc version: `3.1.3`. [2026-04-07 20:27:14] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/db/db_def.json` (encoding: UTF-8). [2026-04-07 20:27:14] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:14] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/magic_bytes.json` (encoding: UTF-8). [2026-04-07 20:27:14] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:14] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/urls.json` (encoding: UTF-8). [2026-04-07 20:27:14] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:14] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/id_types.json` (encoding: UTF-8). [2026-04-07 20:27:14] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:14] [TRACE] [OmnipathR] Cache locked: FALSE Note: wrong number of arguments to '/' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location [2026-04-07 20:27:17] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/.cache/OmnipathR/cache.json` (encoding: UTF-8). [2026-04-07 20:27:17] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:17] [INFO] [OmnipathR] Initialized cache: `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:17] [INFO] [OmnipathR] Package `OmnipathR` packaged: 2026-04-06 19:48:21 UTC; omnipath [2026-04-07 20:27:17] [INFO] [OmnipathR] Package `OmnipathR` date/publication: NA [2026-04-07 20:27:17] [INFO] [OmnipathR] Package `OmnipathR` built: R 4.6.0; ; 2026-04-06 19:48:23 UTC; unix [2026-04-07 20:27:17] [INFO] [OmnipathR] Package `OmnipathR` version: 3.19.11 [2026-04-07 20:27:17] [INFO] [OmnipathR] Package `OmnipathR` repository: NA [2026-04-07 20:27:17] [INFO] [OmnipathR] Session info: [version=R Under development (unstable) (2026-03-23 r89685); os=Ubuntu 24.04.2 LTS; system=x86_64, linux-gnu; ui=X11; language=en_GB; collate=C; ctype=en_GB.UTF-8; tz=Europe/Berlin; date=2026-04-07; pandoc=3.1.3 @ /usr/bin/ (via rmarkdown); quarto=NA] [2026-04-07 20:27:17] [INFO] [OmnipathR] External libraries: [cairo=1.18.0; cairoFT=2.13.2/2.15.0; pango=; png=1.6.43; jpeg=8.0; tiff=LIBTIFF, Version 4.5.1; tcl=8.6; curl=8.5.0; zlib=1.3; bzlib=1.0.8, 13-Jul-2019; xz=5.4.5; deflate=1.19; zstd=1.5.5; PCRE=10.42 2022-12-11; ICU=74.2; TRE=TRE 0.8.0 R_fixes (BSD); iconv=glibc 2.39; readline=8.2; BLAS=/opt/R-devel/lib/R/lib/libRblas.so; lapack=/usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.12.0; lapack_version=3.12.0] [2026-04-07 20:27:17] [INFO] [OmnipathR] Loaded packages: backports 1.5.1(2026-04-03); bit 4.6.0(2025-03-06); bit64 4.6.0-1(2025-01-16); blob 1.3.0(2026-01-14); cachem 1.1.0(2024-05-16); cellranger 1.1.0(2016-07-27); checkmate 2.3.4(2026-02-03); cli 3.6.5(2025-04-23); crayon 1.5.3(2024-06-20); curl 7.0.0(2025-08-19); DBI 1.3.0(2026-02-25); digest 0.6.39(2025-11-19); dplyr 1.2.1(2026-04-03); evaluate 1.0.5(2025-08-27); fastmap 1.2.0(2024-05-15); fs 2.0.1(2026-03-24); generics 0.1.4(2025-05-09); glue 1.8.0(2024-09-30); hms 1.1.4(2025-10-17); htmltools 0.5.9(2025-12-04); httr 1.4.8(2026-02-13); httr2 1.2.2(2025-12-08); igraph 2.2.2(2026-02-12); jsonlite 2.0.0(2025-03-27); knitr 1.51(2025-12-20); later 1.4.8(2026-03-05); lattice 0.22-9(2026-02-09); lifecycle 1.0.5(2026-01-08); logger 0.4.1(2025-09-11); lubridate 1.9.5(2026-02-04); magrittr 2.0.5(2026-04-04); Matrix 1.7-5(2026-03-21); memoise 2.0.1(2021-11-26); OmnipathR 3.19.11(2026-04-06); otel 0.2.0(2025-08-29); pillar 1.11.1(2025-09-17); pkgconfig 2.0.3(2019-09-22); prettyunits 1.2.0(2023-09-24); progress 1.2.3(2023-12-06); purrr 1.2.1(2026-01-09); R.methodsS3 1.8.2(2022-06-13); R.oo 1.27.1(2025-05-02); R.utils 2.13.0(2025-02-24); R6 2.6.1(2025-02-15); rappdirs 0.3.4(2026-01-17); Rcpp 1.1.1(2026-01-10); readr 2.2.0(2026-02-19); readxl 1.4.5(2025-03-07); rlang 1.2.0(2026-04-06); rmarkdown 2.31(2026-03-26); RSQLite 2.4.6(2026-02-06); rvest 1.0.5(2025-08-29); sessioninfo 1.2.3(2025-02-05); stringi 1.8.7(2025-03-27); stringr 1.6.0(2025-11-04); tibble 3.3.1(2026-01-11); tidyr 1.3.2(2025-12-19); tidyselect 1.2.1(2024-03-11); timechange 0.4.0(2026-01-29); tzdb 0.5.0(2025-03-15); vctrs 0.7.2(2026-03-21); withr 3.0.2(2024-10-28); wppi 1.19.0(2025-11-18); xfun 0.57(2026-03-20); XML 3.99-0.23(2026-03-20); xml2 1.5.2(2026-01-17); yaml 2.3.12(2025-12-10); zip 2.3.3(2025-05-13) [2026-04-07 20:27:17] [INFO] [OmnipathR] CURL: version: 8.5.0; headers: 8.5.0; ssl_version: OpenSSL/3.0.13; libz_version: 1.3; libssh_version: libssh/0.10.6/openssl/zlib; libidn_version: 2.3.7; host: x86_64-pc-linux-gnu; protocols: dict, file, ftp, ftps, gopher, gophers, http, https, imap, imaps, ldap, ldaps, mqtt, pop3, pop3s, rtmp, rtmpe, rtmps, rtmpt, rtmpte, rtmpts, rtsp, scp, sftp, smb, smbs, smtp, smtps, telnet, tftp; ipv6: TRUE; http2: TRUE; idn: TRUE; url_parser: TRUE [2026-04-07 20:27:17] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2026-04-07 20:27:17] [TRACE] [OmnipathR] Cache is at `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:17] [TRACE] [OmnipathR] Contains 1 files. [2026-04-07 20:27:17] [TRACE] [OmnipathR] Cache is locked: FALSE. [2026-04-07 20:27:17] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/.cache/OmnipathR/cache.json` (encoding: UTF-8). [2026-04-07 20:27:17] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:17] [SUCCESS] [OmnipathR] Removing all cache contents from `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:17] [TRACE] [OmnipathR] Pandoc version: `3.1.3`. [2026-04-07 20:27:17] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/db/db_def.json` (encoding: UTF-8). [2026-04-07 20:27:17] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:17] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/magic_bytes.json` (encoding: UTF-8). [2026-04-07 20:27:17] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:17] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/urls.json` (encoding: UTF-8). [2026-04-07 20:27:17] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:17] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/id_types.json` (encoding: UTF-8). [2026-04-07 20:27:17] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:17] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package can be loaded from final location [2026-04-07 20:27:19] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/.cache/OmnipathR/cache.json` (encoding: UTF-8). [2026-04-07 20:27:19] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:19] [INFO] [OmnipathR] Initialized cache: `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:19] [INFO] [OmnipathR] Package `OmnipathR` packaged: 2026-04-06 19:48:21 UTC; omnipath [2026-04-07 20:27:19] [INFO] [OmnipathR] Package `OmnipathR` date/publication: NA [2026-04-07 20:27:19] [INFO] [OmnipathR] Package `OmnipathR` built: R 4.6.0; ; 2026-04-06 19:48:23 UTC; unix [2026-04-07 20:27:19] [INFO] [OmnipathR] Package `OmnipathR` version: 3.19.11 [2026-04-07 20:27:19] [INFO] [OmnipathR] Package `OmnipathR` repository: NA [2026-04-07 20:27:19] [INFO] [OmnipathR] Session info: [version=R Under development (unstable) (2026-03-23 r89685); os=Ubuntu 24.04.2 LTS; system=x86_64, linux-gnu; ui=X11; language=en_GB; collate=C; ctype=en_GB.UTF-8; tz=Europe/Berlin; date=2026-04-07; pandoc=3.1.3 @ /usr/bin/ (via rmarkdown); quarto=NA] [2026-04-07 20:27:19] [INFO] [OmnipathR] External libraries: [cairo=1.18.0; cairoFT=2.13.2/2.15.0; pango=; png=1.6.43; jpeg=8.0; tiff=LIBTIFF, Version 4.5.1; tcl=8.6; curl=8.5.0; zlib=1.3; bzlib=1.0.8, 13-Jul-2019; xz=5.4.5; deflate=1.19; zstd=1.5.5; PCRE=10.42 2022-12-11; ICU=74.2; TRE=TRE 0.8.0 R_fixes (BSD); iconv=glibc 2.39; readline=8.2; BLAS=/opt/R-devel/lib/R/lib/libRblas.so; lapack=/usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.12.0; lapack_version=3.12.0] [2026-04-07 20:27:20] [INFO] [OmnipathR] Loaded packages: backports 1.5.1(2026-04-03); bit 4.6.0(2025-03-06); bit64 4.6.0-1(2025-01-16); blob 1.3.0(2026-01-14); cachem 1.1.0(2024-05-16); cellranger 1.1.0(2016-07-27); checkmate 2.3.4(2026-02-03); cli 3.6.5(2025-04-23); crayon 1.5.3(2024-06-20); curl 7.0.0(2025-08-19); DBI 1.3.0(2026-02-25); digest 0.6.39(2025-11-19); dplyr 1.2.1(2026-04-03); evaluate 1.0.5(2025-08-27); fastmap 1.2.0(2024-05-15); fs 2.0.1(2026-03-24); generics 0.1.4(2025-05-09); glue 1.8.0(2024-09-30); hms 1.1.4(2025-10-17); htmltools 0.5.9(2025-12-04); httr 1.4.8(2026-02-13); httr2 1.2.2(2025-12-08); igraph 2.2.2(2026-02-12); jsonlite 2.0.0(2025-03-27); knitr 1.51(2025-12-20); later 1.4.8(2026-03-05); lattice 0.22-9(2026-02-09); lifecycle 1.0.5(2026-01-08); logger 0.4.1(2025-09-11); lubridate 1.9.5(2026-02-04); magrittr 2.0.5(2026-04-04); Matrix 1.7-5(2026-03-21); memoise 2.0.1(2021-11-26); OmnipathR 3.19.11(2026-04-06); otel 0.2.0(2025-08-29); pillar 1.11.1(2025-09-17); pkgconfig 2.0.3(2019-09-22); prettyunits 1.2.0(2023-09-24); progress 1.2.3(2023-12-06); purrr 1.2.1(2026-01-09); R.methodsS3 1.8.2(2022-06-13); R.oo 1.27.1(2025-05-02); R.utils 2.13.0(2025-02-24); R6 2.6.1(2025-02-15); rappdirs 0.3.4(2026-01-17); Rcpp 1.1.1(2026-01-10); readr 2.2.0(2026-02-19); readxl 1.4.5(2025-03-07); rlang 1.2.0(2026-04-06); rmarkdown 2.31(2026-03-26); RSQLite 2.4.6(2026-02-06); rvest 1.0.5(2025-08-29); sessioninfo 1.2.3(2025-02-05); stringi 1.8.7(2025-03-27); stringr 1.6.0(2025-11-04); tibble 3.3.1(2026-01-11); tidyr 1.3.2(2025-12-19); tidyselect 1.2.1(2024-03-11); timechange 0.4.0(2026-01-29); tzdb 0.5.0(2025-03-15); vctrs 0.7.2(2026-03-21); withr 3.0.2(2024-10-28); wppi 1.19.0(2025-11-18); xfun 0.57(2026-03-20); XML 3.99-0.23(2026-03-20); xml2 1.5.2(2026-01-17); yaml 2.3.12(2025-12-10); zip 2.3.3(2025-05-13) [2026-04-07 20:27:20] [INFO] [OmnipathR] CURL: version: 8.5.0; headers: 8.5.0; ssl_version: OpenSSL/3.0.13; libz_version: 1.3; libssh_version: libssh/0.10.6/openssl/zlib; libidn_version: 2.3.7; host: x86_64-pc-linux-gnu; protocols: dict, file, ftp, ftps, gopher, gophers, http, https, imap, imaps, ldap, ldaps, mqtt, pop3, pop3s, rtmp, rtmpe, rtmps, rtmpt, rtmpte, rtmpts, rtsp, scp, sftp, smb, smbs, smtp, smtps, telnet, tftp; ipv6: TRUE; http2: TRUE; idn: TRUE; url_parser: TRUE [2026-04-07 20:27:20] [TRACE] [OmnipathR] Running on a build server, wiping cache. [2026-04-07 20:27:20] [TRACE] [OmnipathR] Cache is at `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:20] [TRACE] [OmnipathR] Contains 1 files. [2026-04-07 20:27:20] [TRACE] [OmnipathR] Cache is locked: FALSE. [2026-04-07 20:27:20] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/.cache/OmnipathR/cache.json` (encoding: UTF-8). [2026-04-07 20:27:20] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:20] [SUCCESS] [OmnipathR] Removing all cache contents from `/home/omnipath/.cache/OmnipathR`. [2026-04-07 20:27:20] [TRACE] [OmnipathR] Pandoc version: `3.1.3`. [2026-04-07 20:27:20] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/db/db_def.json` (encoding: UTF-8). [2026-04-07 20:27:20] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:20] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/magic_bytes.json` (encoding: UTF-8). [2026-04-07 20:27:20] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:20] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/urls.json` (encoding: UTF-8). [2026-04-07 20:27:20] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:20] [TRACE] [OmnipathR] Reading JSON from `/home/omnipath/local/R/4.6-3.23/OmnipathR/internal/id_types.json` (encoding: UTF-8). [2026-04-07 20:27:20] [TRACE] [OmnipathR] JSON validation successful: TRUE [2026-04-07 20:27:20] [TRACE] [OmnipathR] Cache locked: FALSE ** testing if installed package keeps a record of temporary installation path * DONE (wppi) The downloaded source packages are in ‘/tmp/RtmpP3pkv9/downloaded_packages’ Warning message: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package ‘igraph’ had non-zero exit status Bioconductor version 3.23 (BiocManager 1.30.27), R Under development (unstable) (2026-03-23 r89685) Old packages: 'igraph' trying URL 'https://cloud.r-project.org/src/contrib/igraph_2.2.3.tar.gz' Content type 'application/x-gzip' length 5126177 bytes (4.9 MB) ================================================== downloaded 4.9 MB * installing *source* package ‘igraph’ ... ** this is package ‘igraph’ version ‘2.2.3’ ** package ‘igraph’ successfully unpacked and MD5 sums checked ** using staged installation libxml2 include directories: -I/usr/include/libxml2 libxml2 library link flags: -lxml2 Using installed GLPK ** libs using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dgetv0.f -o vendor/arpack/dgetv0.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dlaqrb.f -o vendor/arpack/dlaqrb.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dmout.f -o vendor/arpack/dmout.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnaitr.f -o vendor/arpack/dnaitr.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnapps.f -o vendor/arpack/dnapps.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnaup2.f -o vendor/arpack/dnaup2.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnaupd.f -o vendor/arpack/dnaupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dnconv.f -o vendor/arpack/dnconv.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dneigh.f -o vendor/arpack/dneigh.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dneupd.f -o vendor/arpack/dneupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dngets.f -o vendor/arpack/dngets.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsaitr.f -o vendor/arpack/dsaitr.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsapps.f -o vendor/arpack/dsapps.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsaup2.f -o vendor/arpack/dsaup2.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsaupd.f -o vendor/arpack/dsaupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsconv.f -o vendor/arpack/dsconv.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dseigt.f -o vendor/arpack/dseigt.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsesrt.f -o vendor/arpack/dsesrt.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dseupd.f -o vendor/arpack/dseupd.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsgets.f -o vendor/arpack/dsgets.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsortc.f -o vendor/arpack/dsortc.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dsortr.f -o vendor/arpack/dsortr.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dstatn.f -o vendor/arpack/dstatn.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dstats.f -o vendor/arpack/dstats.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dstqrb.f -o vendor/arpack/dstqrb.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/dvout.f -o vendor/arpack/dvout.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/ivout.f -o vendor/arpack/ivout.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/second.f -o vendor/arpack/second.o gfortran -fvisibility=hidden -fpic -g -O2 -c vendor/arpack/wrap.f -o vendor/arpack/wrap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/betweenness.c -o vendor/cigraph/src/centrality/betweenness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/centrality_other.c -o vendor/cigraph/src/centrality/centrality_other.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/centralization.c -o vendor/cigraph/src/centrality/centralization.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/closeness.c -o vendor/cigraph/src/centrality/closeness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/coreness.c -o vendor/cigraph/src/centrality/coreness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/eigenvector.c -o vendor/cigraph/src/centrality/eigenvector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/hub_authority.c -o vendor/cigraph/src/centrality/hub_authority.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/pagerank.c -o vendor/cigraph/src/centrality/pagerank.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack.cpp -o vendor/cigraph/src/centrality/prpack.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_base_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_result.cpp -o vendor/cigraph/src/centrality/prpack/prpack_result.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_solver.cpp -o vendor/cigraph/src/centrality/prpack/prpack_solver.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/prpack/prpack_utils.cpp -o vendor/cigraph/src/centrality/prpack/prpack_utils.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/centrality/truss.cpp -o vendor/cigraph/src/centrality/truss.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer/cliquer.c -o vendor/cigraph/src/cliques/cliquer/cliquer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer/cliquer_graph.c -o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer/reorder.c -o vendor/cigraph/src/cliques/cliquer/reorder.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliquer_wrapper.c -o vendor/cigraph/src/cliques/cliquer_wrapper.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/cliques.c -o vendor/cigraph/src/cliques/cliques.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/glet.c -o vendor/cigraph/src/cliques/glet.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cliques/maximal_cliques.c -o vendor/cigraph/src/cliques/maximal_cliques.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/community_misc.c -o vendor/cigraph/src/community/community_misc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/edge_betweenness.c -o vendor/cigraph/src/community/edge_betweenness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/fast_modularity.c -o vendor/cigraph/src/community/fast_modularity.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/fluid.c -o vendor/cigraph/src/community/fluid.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/infomap/infomap.cc -o vendor/cigraph/src/community/infomap/infomap.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/infomap/infomap_FlowGraph.cc -o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/infomap/infomap_Greedy.cc -o vendor/cigraph/src/community/infomap/infomap_Greedy.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/label_propagation.c -o vendor/cigraph/src/community/label_propagation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/leading_eigenvector.c -o vendor/cigraph/src/community/leading_eigenvector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/leiden.c -o vendor/cigraph/src/community/leiden.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/louvain.c -o vendor/cigraph/src/community/louvain.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/modularity.c -o vendor/cigraph/src/community/modularity.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/optimal_modularity.c -o vendor/cigraph/src/community/optimal_modularity.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/NetDataTypes.cpp -o vendor/cigraph/src/community/spinglass/NetDataTypes.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/NetRoutines.cpp -o vendor/cigraph/src/community/spinglass/NetRoutines.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/clustertool.cpp -o vendor/cigraph/src/community/spinglass/clustertool.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/spinglass/pottsmodel_2.cpp -o vendor/cigraph/src/community/spinglass/pottsmodel_2.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/voronoi.c -o vendor/cigraph/src/community/voronoi.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap.cpp -o vendor/cigraph/src/community/walktrap/walktrap.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap_communities.cpp -o vendor/cigraph/src/community/walktrap/walktrap_communities.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap_graph.cpp -o vendor/cigraph/src/community/walktrap/walktrap_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/community/walktrap/walktrap_heap.cpp -o vendor/cigraph/src/community/walktrap/walktrap_heap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/cohesive_blocks.c -o vendor/cigraph/src/connectivity/cohesive_blocks.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/components.c -o vendor/cigraph/src/connectivity/components.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/percolation.c -o vendor/cigraph/src/connectivity/percolation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/reachability.c -o vendor/cigraph/src/connectivity/reachability.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/connectivity/separators.c -o vendor/cigraph/src/connectivity/separators.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/adjacency.c -o vendor/cigraph/src/constructors/adjacency.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/atlas.c -o vendor/cigraph/src/constructors/atlas.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/basic_constructors.c -o vendor/cigraph/src/constructors/basic_constructors.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/circulant.c -o vendor/cigraph/src/constructors/circulant.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/de_bruijn.c -o vendor/cigraph/src/constructors/de_bruijn.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/famous.c -o vendor/cigraph/src/constructors/famous.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/full.c -o vendor/cigraph/src/constructors/full.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/generalized_petersen.c -o vendor/cigraph/src/constructors/generalized_petersen.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/kautz.c -o vendor/cigraph/src/constructors/kautz.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/lattices.c -o vendor/cigraph/src/constructors/lattices.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/lcf.c -o vendor/cigraph/src/constructors/lcf.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/linegraph.c -o vendor/cigraph/src/constructors/linegraph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/mycielskian.c -o vendor/cigraph/src/constructors/mycielskian.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/prufer.c -o vendor/cigraph/src/constructors/prufer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/regular.c -o vendor/cigraph/src/constructors/regular.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/constructors/trees.c -o vendor/cigraph/src/constructors/trees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/array.c -o vendor/cigraph/src/core/array.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/bitset.c -o vendor/cigraph/src/core/bitset.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/bitset_list.c -o vendor/cigraph/src/core/bitset_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/buckets.c -o vendor/cigraph/src/core/buckets.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/cutheap.c -o vendor/cigraph/src/core/cutheap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/dqueue.c -o vendor/cigraph/src/core/dqueue.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/error.c -o vendor/cigraph/src/core/error.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/estack.c -o vendor/cigraph/src/core/estack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/fixed_vectorlist.c -o vendor/cigraph/src/core/fixed_vectorlist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/genheap.c -o vendor/cigraph/src/core/genheap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/grid.c -o vendor/cigraph/src/core/grid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/heap.c -o vendor/cigraph/src/core/heap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/indheap.c -o vendor/cigraph/src/core/indheap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/interruption.c -o vendor/cigraph/src/core/interruption.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/marked_queue.c -o vendor/cigraph/src/core/marked_queue.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/matrix.c -o vendor/cigraph/src/core/matrix.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/matrix_list.c -o vendor/cigraph/src/core/matrix_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/memory.c -o vendor/cigraph/src/core/memory.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/printing.c -o vendor/cigraph/src/core/printing.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/progress.c -o vendor/cigraph/src/core/progress.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/psumtree.c -o vendor/cigraph/src/core/psumtree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/set.c -o vendor/cigraph/src/core/set.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/sparsemat.c -o vendor/cigraph/src/core/sparsemat.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/stack.c -o vendor/cigraph/src/core/stack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/statusbar.c -o vendor/cigraph/src/core/statusbar.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/strvector.c -o vendor/cigraph/src/core/strvector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/trie.c -o vendor/cigraph/src/core/trie.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/vector.c -o vendor/cigraph/src/core/vector.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/vector_list.c -o vendor/cigraph/src/core/vector_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/core/vector_ptr.c -o vendor/cigraph/src/core/vector_ptr.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/cycles/simple_cycles.c -o vendor/cigraph/src/cycles/simple_cycles.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/flow/flow.c -o vendor/cigraph/src/flow/flow.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/flow/flow_conversion.c -o vendor/cigraph/src/flow/flow_conversion.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/flow/st-cuts.c -o vendor/cigraph/src/flow/st-cuts.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/barabasi.c -o vendor/cigraph/src/games/barabasi.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/callaway_traits.c -o vendor/cigraph/src/games/callaway_traits.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/chung_lu.c -o vendor/cigraph/src/games/chung_lu.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/citations.c -o vendor/cigraph/src/games/citations.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/correlated.c -o vendor/cigraph/src/games/correlated.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence.c -o vendor/cigraph/src/games/degree_sequence.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/dotproduct.c -o vendor/cigraph/src/games/dotproduct.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/erdos_renyi.c -o vendor/cigraph/src/games/erdos_renyi.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/establishment.c -o vendor/cigraph/src/games/establishment.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/forestfire.c -o vendor/cigraph/src/games/forestfire.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/grg.c -o vendor/cigraph/src/games/grg.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/growing_random.c -o vendor/cigraph/src/games/growing_random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/islands.c -o vendor/cigraph/src/games/islands.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/k_regular.c -o vendor/cigraph/src/games/k_regular.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/preference.c -o vendor/cigraph/src/games/preference.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/recent_degree.c -o vendor/cigraph/src/games/recent_degree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/sbm.c -o vendor/cigraph/src/games/sbm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/static_fitness.c -o vendor/cigraph/src/games/static_fitness.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/tree.c -o vendor/cigraph/src/games/tree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/games/watts_strogatz.c -o vendor/cigraph/src/games/watts_strogatz.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/adjlist.c -o vendor/cigraph/src/graph/adjlist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/attributes.c -o vendor/cigraph/src/graph/attributes.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/basic_query.c -o vendor/cigraph/src/graph/basic_query.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/caching.c -o vendor/cigraph/src/graph/caching.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/cattributes.c -o vendor/cigraph/src/graph/cattributes.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/graph_list.c -o vendor/cigraph/src/graph/graph_list.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/iterators.c -o vendor/cigraph/src/graph/iterators.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/type_common.c -o vendor/cigraph/src/graph/type_common.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/type_indexededgelist.c -o vendor/cigraph/src/graph/type_indexededgelist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/graph/visitors.c -o vendor/cigraph/src/graph/visitors.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/hrg/hrg.cc -o vendor/cigraph/src/hrg/hrg.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/hrg/hrg_types.cc -o vendor/cigraph/src/hrg/hrg_types.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/glpk_support.c -o vendor/cigraph/src/internal/glpk_support.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/hacks.c -o vendor/cigraph/src/internal/hacks.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/lsap.c -o vendor/cigraph/src/internal/lsap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/qsort.c -o vendor/cigraph/src/internal/qsort.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/qsort_r.c -o vendor/cigraph/src/internal/qsort_r.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/utils.c -o vendor/cigraph/src/internal/utils.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/internal/zeroin.c -o vendor/cigraph/src/internal/zeroin.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/dimacs.c -o vendor/cigraph/src/io/dimacs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/dl.c -o vendor/cigraph/src/io/dl.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/dot.c -o vendor/cigraph/src/io/dot.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/edgelist.c -o vendor/cigraph/src/io/edgelist.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/gml-tree.c -o vendor/cigraph/src/io/gml-tree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/gml.c -o vendor/cigraph/src/io/gml.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/graphdb.c -o vendor/cigraph/src/io/graphdb.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/graphml.c -o vendor/cigraph/src/io/graphml.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/leda.c -o vendor/cigraph/src/io/leda.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/lgl.c -o vendor/cigraph/src/io/lgl.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/ncol.c -o vendor/cigraph/src/io/ncol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/pajek.c -o vendor/cigraph/src/io/pajek.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/io/parse_utils.c -o vendor/cigraph/src/io/parse_utils.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss.cc -o vendor/cigraph/src/isomorphism/bliss.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/defs.cc -o vendor/cigraph/src/isomorphism/bliss/defs.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/graph.cc -o vendor/cigraph/src/isomorphism/bliss/graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/heap.cc -o vendor/cigraph/src/isomorphism/bliss/heap.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/orbit.cc -o vendor/cigraph/src/isomorphism/bliss/orbit.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/partition.cc -o vendor/cigraph/src/isomorphism/bliss/partition.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/uintseqhash.cc -o vendor/cigraph/src/isomorphism/bliss/uintseqhash.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/bliss/utils.cc -o vendor/cigraph/src/isomorphism/bliss/utils.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/isoclasses.c -o vendor/cigraph/src/isomorphism/isoclasses.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/isomorphism_misc.c -o vendor/cigraph/src/isomorphism/isomorphism_misc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/lad.c -o vendor/cigraph/src/isomorphism/lad.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/queries.c -o vendor/cigraph/src/isomorphism/queries.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/isomorphism/vf2.c -o vendor/cigraph/src/isomorphism/vf2.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/align.c -o vendor/cigraph/src/layout/align.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/circular.c -o vendor/cigraph/src/layout/circular.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/davidson_harel.c -o vendor/cigraph/src/layout/davidson_harel.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/DensityGrid.cpp -o vendor/cigraph/src/layout/drl/DensityGrid.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/DensityGrid_3d.cpp -o vendor/cigraph/src/layout/drl/DensityGrid_3d.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_graph.cpp -o vendor/cigraph/src/layout/drl/drl_graph.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_graph_3d.cpp -o vendor/cigraph/src/layout/drl/drl_graph_3d.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_layout.cpp -o vendor/cigraph/src/layout/drl/drl_layout.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_layout_3d.cpp -o vendor/cigraph/src/layout/drl/drl_layout_3d.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/drl/drl_parse.cpp -o vendor/cigraph/src/layout/drl/drl_parse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/fruchterman_reingold.c -o vendor/cigraph/src/layout/fruchterman_reingold.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/gem.c -o vendor/cigraph/src/layout/gem.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/graphopt.c -o vendor/cigraph/src/layout/graphopt.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/kamada_kawai.c -o vendor/cigraph/src/layout/kamada_kawai.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/large_graph.c -o vendor/cigraph/src/layout/large_graph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/layout_bipartite.c -o vendor/cigraph/src/layout/layout_bipartite.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/layout_grid.c -o vendor/cigraph/src/layout/layout_grid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/layout_random.c -o vendor/cigraph/src/layout/layout_random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/mds.c -o vendor/cigraph/src/layout/mds.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/merge_dla.c -o vendor/cigraph/src/layout/merge_dla.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/merge_grid.c -o vendor/cigraph/src/layout/merge_grid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/reingold_tilford.c -o vendor/cigraph/src/layout/reingold_tilford.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/sugiyama.c -o vendor/cigraph/src/layout/sugiyama.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/layout/umap.c -o vendor/cigraph/src/layout/umap.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/arpack.c -o vendor/cigraph/src/linalg/arpack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/blas.c -o vendor/cigraph/src/linalg/blas.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/eigen.c -o vendor/cigraph/src/linalg/eigen.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/linalg/lapack.c -o vendor/cigraph/src/linalg/lapack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/math/complex.c -o vendor/cigraph/src/math/complex.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/math/safe_intop.c -o vendor/cigraph/src/math/safe_intop.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/math/utils.c -o vendor/cigraph/src/math/utils.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/bipartite.c -o vendor/cigraph/src/misc/bipartite.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/chordality.c -o vendor/cigraph/src/misc/chordality.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/cocitation.c -o vendor/cigraph/src/misc/cocitation.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/coloring.c -o vendor/cigraph/src/misc/coloring.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/conversion.c -o vendor/cigraph/src/misc/conversion.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/cycle_bases.c -o vendor/cigraph/src/misc/cycle_bases.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/degree_sequence.cpp -o vendor/cigraph/src/misc/degree_sequence.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/embedding.c -o vendor/cigraph/src/misc/embedding.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/feedback_arc_set.c -o vendor/cigraph/src/misc/feedback_arc_set.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/graphicality.c -o vendor/cigraph/src/misc/graphicality.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/matching.c -o vendor/cigraph/src/misc/matching.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/microscopic_update.c -o vendor/cigraph/src/misc/microscopic_update.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/mixing.c -o vendor/cigraph/src/misc/mixing.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/motifs.c -o vendor/cigraph/src/misc/motifs.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/order_cycle.cpp -o vendor/cigraph/src/misc/order_cycle.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/other.c -o vendor/cigraph/src/misc/other.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/power_law_fit.c -o vendor/cigraph/src/misc/power_law_fit.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/scan.c -o vendor/cigraph/src/misc/scan.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/sir.c -o vendor/cigraph/src/misc/sir.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/misc/spanning_trees.c -o vendor/cigraph/src/misc/spanning_trees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/add_edge.c -o vendor/cigraph/src/operators/add_edge.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/complementer.c -o vendor/cigraph/src/operators/complementer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/compose.c -o vendor/cigraph/src/operators/compose.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/connect_neighborhood.c -o vendor/cigraph/src/operators/connect_neighborhood.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/contract.c -o vendor/cigraph/src/operators/contract.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/difference.c -o vendor/cigraph/src/operators/difference.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/disjoint_union.c -o vendor/cigraph/src/operators/disjoint_union.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/intersection.c -o vendor/cigraph/src/operators/intersection.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/join.c -o vendor/cigraph/src/operators/join.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/misc_internal.c -o vendor/cigraph/src/operators/misc_internal.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/permute.c -o vendor/cigraph/src/operators/permute.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/products.c -o vendor/cigraph/src/operators/products.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/reverse.c -o vendor/cigraph/src/operators/reverse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/rewire.c -o vendor/cigraph/src/operators/rewire.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/rewire_edges.c -o vendor/cigraph/src/operators/rewire_edges.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/simplify.c -o vendor/cigraph/src/operators/simplify.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/subgraph.c -o vendor/cigraph/src/operators/subgraph.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/operators/union.c -o vendor/cigraph/src/operators/union.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/all_shortest_paths.c -o vendor/cigraph/src/paths/all_shortest_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/astar.c -o vendor/cigraph/src/paths/astar.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/bellman_ford.c -o vendor/cigraph/src/paths/bellman_ford.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/dijkstra.c -o vendor/cigraph/src/paths/dijkstra.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/distances.c -o vendor/cigraph/src/paths/distances.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/eulerian.c -o vendor/cigraph/src/paths/eulerian.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/floyd_warshall.c -o vendor/cigraph/src/paths/floyd_warshall.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/histogram.c -o vendor/cigraph/src/paths/histogram.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/johnson.c -o vendor/cigraph/src/paths/johnson.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/random_walk.c -o vendor/cigraph/src/paths/random_walk.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/shortest_paths.c -o vendor/cigraph/src/paths/shortest_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/simple_paths.c -o vendor/cigraph/src/paths/simple_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/sparsifier.c -o vendor/cigraph/src/paths/sparsifier.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/unweighted.c -o vendor/cigraph/src/paths/unweighted.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/voronoi.c -o vendor/cigraph/src/paths/voronoi.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/paths/widest_paths.c -o vendor/cigraph/src/paths/widest_paths.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/basic_properties.c -o vendor/cigraph/src/properties/basic_properties.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/complete.c -o vendor/cigraph/src/properties/complete.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/constraint.c -o vendor/cigraph/src/properties/constraint.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/convergence_degree.c -o vendor/cigraph/src/properties/convergence_degree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/dag.c -o vendor/cigraph/src/properties/dag.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/degrees.c -o vendor/cigraph/src/properties/degrees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/ecc.c -o vendor/cigraph/src/properties/ecc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/girth.c -o vendor/cigraph/src/properties/girth.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/loops.c -o vendor/cigraph/src/properties/loops.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/multiplicity.c -o vendor/cigraph/src/properties/multiplicity.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/neighborhood.c -o vendor/cigraph/src/properties/neighborhood.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/perfect.c -o vendor/cigraph/src/properties/perfect.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/rich_club.c -o vendor/cigraph/src/properties/rich_club.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/spectral.c -o vendor/cigraph/src/properties/spectral.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/trees.c -o vendor/cigraph/src/properties/trees.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/properties/triangles.c -o vendor/cigraph/src/properties/triangles.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/random.c -o vendor/cigraph/src/random/random.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_glibc2.c -o vendor/cigraph/src/random/rng_glibc2.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_mt19937.c -o vendor/cigraph/src/random/rng_mt19937.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_pcg32.c -o vendor/cigraph/src/random/rng_pcg32.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/random/rng_pcg64.c -o vendor/cigraph/src/random/rng_pcg64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/src/version.c -o vendor/cigraph/src/version.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_add.c -o vendor/cigraph/vendor/cs/cs_add.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_amd.c -o vendor/cigraph/vendor/cs/cs_amd.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_chol.c -o vendor/cigraph/vendor/cs/cs_chol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_cholsol.c -o vendor/cigraph/vendor/cs/cs_cholsol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_compress.c -o vendor/cigraph/vendor/cs/cs_compress.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_counts.c -o vendor/cigraph/vendor/cs/cs_counts.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_cumsum.c -o vendor/cigraph/vendor/cs/cs_cumsum.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dfs.c -o vendor/cigraph/vendor/cs/cs_dfs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dmperm.c -o vendor/cigraph/vendor/cs/cs_dmperm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_droptol.c -o vendor/cigraph/vendor/cs/cs_droptol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dropzeros.c -o vendor/cigraph/vendor/cs/cs_dropzeros.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_dupl.c -o vendor/cigraph/vendor/cs/cs_dupl.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_entry.c -o vendor/cigraph/vendor/cs/cs_entry.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_ereach.c -o vendor/cigraph/vendor/cs/cs_ereach.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_etree.c -o vendor/cigraph/vendor/cs/cs_etree.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_fkeep.c -o vendor/cigraph/vendor/cs/cs_fkeep.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_gaxpy.c -o vendor/cigraph/vendor/cs/cs_gaxpy.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_happly.c -o vendor/cigraph/vendor/cs/cs_happly.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_house.c -o vendor/cigraph/vendor/cs/cs_house.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_ipvec.c -o vendor/cigraph/vendor/cs/cs_ipvec.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_leaf.c -o vendor/cigraph/vendor/cs/cs_leaf.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_load.c -o vendor/cigraph/vendor/cs/cs_load.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_lsolve.c -o vendor/cigraph/vendor/cs/cs_lsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_ltsolve.c -o vendor/cigraph/vendor/cs/cs_ltsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_lu.c -o vendor/cigraph/vendor/cs/cs_lu.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_lusol.c -o vendor/cigraph/vendor/cs/cs_lusol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_malloc.c -o vendor/cigraph/vendor/cs/cs_malloc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_maxtrans.c -o vendor/cigraph/vendor/cs/cs_maxtrans.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_multiply.c -o vendor/cigraph/vendor/cs/cs_multiply.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_norm.c -o vendor/cigraph/vendor/cs/cs_norm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_permute.c -o vendor/cigraph/vendor/cs/cs_permute.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_pinv.c -o vendor/cigraph/vendor/cs/cs_pinv.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_post.c -o vendor/cigraph/vendor/cs/cs_post.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_print.c -o vendor/cigraph/vendor/cs/cs_print.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_pvec.c -o vendor/cigraph/vendor/cs/cs_pvec.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_qr.c -o vendor/cigraph/vendor/cs/cs_qr.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_qrsol.c -o vendor/cigraph/vendor/cs/cs_qrsol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_randperm.c -o vendor/cigraph/vendor/cs/cs_randperm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_reach.c -o vendor/cigraph/vendor/cs/cs_reach.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_scatter.c -o vendor/cigraph/vendor/cs/cs_scatter.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_scc.c -o vendor/cigraph/vendor/cs/cs_scc.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_schol.c -o vendor/cigraph/vendor/cs/cs_schol.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_spsolve.c -o vendor/cigraph/vendor/cs/cs_spsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_sqr.c -o vendor/cigraph/vendor/cs/cs_sqr.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_symperm.c -o vendor/cigraph/vendor/cs/cs_symperm.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_tdfs.c -o vendor/cigraph/vendor/cs/cs_tdfs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_transpose.c -o vendor/cigraph/vendor/cs/cs_transpose.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_updown.c -o vendor/cigraph/vendor/cs/cs_updown.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_usolve.c -o vendor/cigraph/vendor/cs/cs_usolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_util.c -o vendor/cigraph/vendor/cs/cs_util.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/cs/cs_utsolve.c -o vendor/cigraph/vendor/cs/cs_utsolve.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-advance-128.c -o vendor/cigraph/vendor/pcg/pcg-advance-128.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-advance-64.c -o vendor/cigraph/vendor/pcg/pcg-advance-64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-output-128.c -o vendor/cigraph/vendor/pcg/pcg-output-128.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-output-32.c -o vendor/cigraph/vendor/pcg/pcg-output-32.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-output-64.c -o vendor/cigraph/vendor/pcg/pcg-output-64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-rngs-128.c -o vendor/cigraph/vendor/pcg/pcg-rngs-128.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/pcg/pcg-rngs-64.c -o vendor/cigraph/vendor/pcg/pcg-rngs-64.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/gss.c -o vendor/cigraph/vendor/plfit/gss.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/hzeta.c -o vendor/cigraph/vendor/plfit/hzeta.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/kolmogorov.c -o vendor/cigraph/vendor/plfit/kolmogorov.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/lbfgs.c -o vendor/cigraph/vendor/plfit/lbfgs.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/mt.c -o vendor/cigraph/vendor/plfit/mt.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/options.c -o vendor/cigraph/vendor/plfit/options.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/plfit.c -o vendor/cigraph/vendor/plfit/plfit.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/plfit_error.c -o vendor/cigraph/vendor/plfit/plfit_error.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/rbinom.c -o vendor/cigraph/vendor/plfit/rbinom.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/cigraph/vendor/plfit/sampling.c -o vendor/cigraph/vendor/plfit/sampling.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/dl-lexer.c -o vendor/io/dl-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/dl-parser.c -o vendor/io/dl-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/gml-lexer.c -o vendor/io/gml-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/gml-parser.c -o vendor/io/gml-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/lgl-lexer.c -o vendor/io/lgl-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/lgl-parser.c -o vendor/io/lgl-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/ncol-lexer.c -o vendor/io/ncol-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/ncol-parser.c -o vendor/io/ncol-parser.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/pajek-lexer.c -o vendor/io/pajek-lexer.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/io/pajek-parser.c -o vendor/io/pajek-parser.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Color.cpp -o vendor/simpleraytracer/Color.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Light.cpp -o vendor/simpleraytracer/Light.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Point.cpp -o vendor/simpleraytracer/Point.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Ray.cpp -o vendor/simpleraytracer/Ray.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/RayTracer.cpp -o vendor/simpleraytracer/RayTracer.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/RayVector.cpp -o vendor/simpleraytracer/RayVector.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Shape.cpp -o vendor/simpleraytracer/Shape.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Sphere.cpp -o vendor/simpleraytracer/Sphere.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/Triangle.cpp -o vendor/simpleraytracer/Triangle.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/simpleraytracer/unit_limiter.cpp -o vendor/simpleraytracer/unit_limiter.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/clear.c -o vendor/uuid/clear.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/compare.c -o vendor/uuid/compare.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/copy.c -o vendor/uuid/copy.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/gen_uuid.c -o vendor/uuid/gen_uuid.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/isnull.c -o vendor/uuid/isnull.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/pack.c -o vendor/uuid/pack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/parse.c -o vendor/uuid/parse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/unpack.c -o vendor/uuid/unpack.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c vendor/uuid/unparse.c -o vendor/uuid/unparse.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rinterface.c -o rinterface.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rinterface_extra.c -o rinterface_extra.o rinterface_extra.c: In function ‘R_igraph_progress_handler’: rinterface_extra.c:2387:9: warning: implicit declaration of function ‘R_getRegisteredNamespace’ [-Wimplicit-function-declaration] 2387 | rho = R_getRegisteredNamespace("igraph"); | ^~~~~~~~~~~~~~~~~~~~~~~~ rinterface_extra.c:2387:7: warning: assignment to ‘SEXP’ {aka ‘struct SEXPREC *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2387 | rho = R_getRegisteredNamespace("igraph"); | ^ rinterface_extra.c: In function ‘R_igraph_status_handler’: rinterface_extra.c:2410:7: warning: assignment to ‘SEXP’ {aka ‘struct SEXPREC *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2410 | rho = R_getRegisteredNamespace("igraph"); | ^ rinterface_extra.c: In function ‘R_igraph_finalizer’: rinterface_extra.c:2514:7: warning: assignment to ‘SEXP’ {aka ‘struct SEXPREC *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2514 | rho = R_getRegisteredNamespace("igraph"); | ^ gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rrandom.c -o rrandom.o gcc -std=gnu2x -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c uuid.c -o uuid.o g++ -std=gnu++20 -I"/opt/R-devel/lib/R/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/omnipath/local/R/4.6-3.23/cpp11/include' -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c cpp11.cpp -o cpp11.o In file included from /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11.hpp:3, from /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11/declarations.hpp:13, from cpp11.cpp:5: /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11/R.hpp: In function ‘SEXPREC* cpp11::detail::r_ns_env(const char*)’: /home/omnipath/local/R/4.6-3.23/cpp11/include/cpp11/R.hpp:128:10: error: ‘R_getRegisteredNamespace’ was not declared in this scope 128 | return R_getRegisteredNamespace(name); | ^~~~~~~~~~~~~~~~~~~~~~~~ make: *** [/opt/R-devel/lib/R/etc/Makeconf:199: cpp11.o] Error 1 ERROR: compilation failed for package ‘igraph’ * removing ‘/home/omnipath/local/R/4.6-3.23/igraph’ * restoring previous ‘/home/omnipath/local/R/4.6-3.23/igraph’ The downloaded source packages are in ‘/tmp/RtmpP3pkv9/downloaded_packages’ Warning messages: 1: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' 2: In install.packages(update[instlib == l, "Package"], l, contriburl = contriburl, : installation of package ‘igraph’ had non-zero exit status [ Finished: 2026-04-07 20:29:20 CEST ]