[ Started: 2026-10-22 17:33:00 CEST ]
[ CARNIVAL v2.5.1 for BioC-3.24 from https://github.com/saezlab/CARNIVAL@dev (81a0120 2022-03-17 09:59:10) ]
[ R version 4.6.1 Patched (2026-10-12 r90666) -- "Happy Hop" at /opt/R-4.6-patched/bin ]

[1] "Libraries: "                      "/home/omnipath/local/R/4.6-3.24" 
[3] "/home/omnipath/local/R/4.6"       "/opt/R-4.6-patched/lib/R/library"
trying URL 'https://cran.uni-muenster.de/src/contrib/Deriv_4.3.6.tar.gz'
Content type 'application/x-gzip' length 47790 bytes (46 KB)
==================================================
downloaded 46 KB

* installing *source* package ‘Deriv’ ...
** this is package ‘Deriv’ version ‘4.3.6’
** package ‘Deriv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
g++ -std=gnu++20 -I"/opt/R-4.6-patched/lib/R/include" -DNDEBUG  -I'/home/omnipath/local/R/4.6-3.24/Rcpp/include' -I/usr/local/include    -fpic  -g -O2   -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/opt/R-4.6-patched/lib/R/include" -DNDEBUG  -I'/home/omnipath/local/R/4.6-3.24/Rcpp/include' -I/usr/local/include    -fpic  -g -O2   -c derive_simplif.cpp -o derive_simplif.o
g++ -std=gnu++20 -shared -L/opt/R-4.6-patched/lib/R/lib -L/usr/local/lib -o Deriv.so RcppExports.o derive_simplif.o -L/opt/R-4.6-patched/lib/R/lib -lR
installing to /home/omnipath/local/R/4.6-3.24/00LOCK-Deriv/00new/Deriv/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Deriv)

The downloaded source packages are in
	‘/tmp/Rtmp7dIIG7/downloaded_packages’
Bioconductor version 3.24 (BiocManager 1.30.27), R 4.6.1 Patched (2026-10-12
  r90666)
Bioconductor version 3.24 (BiocManager 1.30.27), R 4.6.1 Patched (2026-10-12
  r90666)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

[ Finished: 2026-10-22 17:33:17 CEST ]