[ Started: 2022-10-16 20:01:45 CEST ]
[ cosmosR v1.5.1 for BioC-3.16 from https://github.com/saezlab/cosmosR@master ]
[1] "Libraries: "                     "/home/omnipath/local/R/4.2-3.16"
[3] "/home/omnipath/local/R/4.2"      "/usr/lib/R/library"             
'getOption("repos")' replaces Bioconductor standard repositories, see
'?repositories' for details

replacement repositories:
    CRAN: https://cloud.r-project.org

Bioconductor version 3.16 (BiocManager 1.30.18), R 4.2.1 (2022-06-23)

Skipping 23 packages ahead of CRAN: BiocParallel, limma, zlibbioc, GenomeInfoDbData, GenomeInfoDb, XVector, Biostrings, KEGGREST, S4Vectors, IRanges, Biobase, BiocGenerics, AnnotationDbi, fgsea, marray, graph, annotate, viper, bcellViper, piano, GSEABase, dorothea, CARNIVAL
[ Finished: 2022-10-16 20:01:52 CEST ]