[ Started: 2023-06-16 22:29:42 CEST ]
[ cosmosR v1.5.2 for BioC-3.17 from https://github.com/saezlab/cosmosR@master ]

Loading required package: BiocCheck
─ BiocCheckVersion: 1.36.0
─ BiocVersion: 3.17
─ Package: cosmosR
─ PackageVersion: 1.5.2
─ sourceDir: /tmp/Rtmp3ZzLlR/file1a7dbe6165e5c7/cosmosR
─ installDir: /tmp/Rtmp3ZzLlR/file1a7dbe576acab9
─ BiocCheckDir: /mnt/disk0/build/bioc-check/cosmosr/bioc-3.17/2023-06-16_2229/cosmosR/cosmosR.BiocCheck
─ platform: unix
─ isTarBall: TRUE

* Installing package...
* Checking for deprecated package usage...
Error in `[.data.frame`(pkg_status, , "PackageStatus") : 
  undefined columns selected
Calls: BiocCheck ... getAllDeprecatedPkgs -> get_deprecated_status -> [ -> [.data.frame
Execution halted
[ Finished: 2023-06-16 22:29:49 CEST ]