[ Started: 2023-09-18 23:59:22 CEST ] [ cosmosR v1.5.2 for BioC-3.17 from https://github.com/saezlab/cosmosR@master ] [1] "Libraries: " "/home/omnipath/local/R/4.3-3.17" [3] "/home/omnipath/local/R/4.3" "/opt/R-devel/lib/R/library" Bioconductor version 3.17 (BiocManager 1.30.22), R 4.3.0 (2023-04-21) Bioconductor version 3.17 (BiocManager 1.30.22), R 4.3.0 (2023-04-21) Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' Skipping 1 packages ahead of CRAN: rmarkdown [ Finished: 2023-09-18 23:59:28 CEST ]