[ Started: 2025-02-27 01:00:55 CET ]
[ cosmosR v1.9.1 for BioC-3.21 from https://github.com/saezlab/cosmosR@master (81d1a7f 2024-07-23 10:15:19) ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.5-3.21"
[3] "/home/omnipath/local/R/4.5"      "/opt/R-devel/lib/R/library"     
Bioconductor version 3.21 (BiocManager 1.30.25), R Under development (unstable)
  (2025-02-12 r87715)
Old packages: 'tinytex'
trying URL 'https://cloud.r-project.org/src/contrib/tinytex_0.56.tar.gz'
Content type 'application/x-gzip' length 35918 bytes (35 KB)
==================================================
downloaded 35 KB

* installing *source* package ‘tinytex’ ...
** this is package ‘tinytex’ version ‘0.56’
** package ‘tinytex’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tinytex)

The downloaded source packages are in
	‘/tmp/RtmpYl0tsi/downloaded_packages’
Bioconductor version 3.21 (BiocManager 1.30.25), R Under development (unstable)
  (2025-02-12 r87715)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

Skipping 1 packages ahead of CRAN: tinytex
[ Finished: 2025-02-27 01:01:04 CET ]