[ Started: 2025-05-29 02:56:52 CEST ] [ cosmosR v1.9.1 for BioC-3.21 from https://github.com/saezlab/cosmosR@master (ef9d5aa 2025-03-09 13:20:11) ] Hit:1 http://de.archive.ubuntu.com/ubuntu noble InRelease Hit:2 http://de.archive.ubuntu.com/ubuntu noble-updates InRelease Hit:3 http://ppa.launchpad.net/deadsnakes/ppa/ubuntu noble InRelease Hit:4 https://cloud.r-project.org/bin/linux/ubuntu noble-cran40/ InRelease Hit:5 http://de.archive.ubuntu.com/ubuntu noble-backports InRelease Ign:6 http://security.ubuntu.com/ubuntu noble-security InRelease Ign:6 http://security.ubuntu.com/ubuntu noble-security InRelease Ign:6 http://security.ubuntu.com/ubuntu noble-security InRelease Err:6 http://security.ubuntu.com/ubuntu noble-security InRelease Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4002:1::103). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4002:1::102). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4000:1::103). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4000:1::101). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4000:1::102). - connect (101: Network is unreachable) Could not connect to security.ubuntu.com:80 (185.125.190.82), connection timed out Could not connect to security.ubuntu.com:80 (91.189.91.83), connection timed out Could not connect to security.ubuntu.com:80 (91.189.91.82), connection timed out Could not connect to security.ubuntu.com:80 (185.125.190.81), connection timed out Could not connect to security.ubuntu.com:80 (185.125.190.83), connection timed out [IP: 185.125.190.83 80] Reading package lists... W: Failed to fetch http://security.ubuntu.com/ubuntu/dists/noble-security/InRelease Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4002:1::103). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4002:1::102). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4000:1::103). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4000:1::101). - connect (101: Network is unreachable) Cannot initiate the connection to security.ubuntu.com:80 (2620:2d:4000:1::102). - connect (101: Network is unreachable) Could not connect to security.ubuntu.com:80 (185.125.190.82), connection timed out Could not connect to security.ubuntu.com:80 (91.189.91.83), connection timed out Could not connect to security.ubuntu.com:80 (91.189.91.82), connection timed out Could not connect to security.ubuntu.com:80 (185.125.190.81), connection timed out Could not connect to security.ubuntu.com:80 (185.125.190.83), connection timed out [IP: 185.125.190.83 80] W: Some index files failed to download. They have been ignored, or old ones used instead. [1] "Libraries: " "/home/omnipath/local/R/4.5-3.21" [3] "/home/omnipath/local/R/4.5" "/opt/R-devel/lib/R/library" Error in match.arg(os_release, os_versions[[os]]) : 'arg' should be one of “14.04”, “16.04”, “18.04”, “20.04”, “22.04” Calls: sapply -> lapply -> system_requirements -> match.arg Execution halted [ Finished: 2025-05-29 02:58:05 CEST ]