[ Started: 2022-10-18 20:03:54 CEST ]
[ decoupleR v2.3.2 for BioC-3.16 from https://github.com/saezlab/decoupleR@master ]
[1] "Libraries: "                     "/home/omnipath/local/R/4.2-3.16"
[3] "/home/omnipath/local/R/4.2"      "/usr/lib/R/library"             
'getOption("repos")' replaces Bioconductor standard repositories, see
'?repositories' for details

replacement repositories:
    CRAN: https://cloud.r-project.org

Bioconductor version 3.16 (BiocManager 1.30.18), R 4.2.1 (2022-06-23)

Skipping 37 packages ahead of CRAN: digest, sys, yaml, GenomeInfoDbData, IRanges, S4Vectors, BiocGenerics, zlibbioc, XVector, GenomeInfoDb, MatrixGenerics, beachmat, ScaledMatrix, BiocParallel, DelayedArray, Rhdf5lib, rhdf5filters, rhdf5, sparseMatrixStats, Biobase, GenomicRanges, SummarizedExperiment, Biostrings, KEGGREST, AnnotationDbi, graph, annotate, GSEABase, DelayedMatrixStats, BiocSingular, HDF5Array, SingleCellExperiment, BiocStyle, AUCell, fgsea, viper, GSVA
[ Finished: 2022-10-18 20:04:02 CEST ]