[ Started: 2022-10-15 20:12:15 CEST ] [ dorothea v1.7.2 for BioC-3.16 from https://github.com/saezlab/dorothea@master ] [1] "Libraries: " "/home/omnipath/local/R/4.2-3.16" [3] "/home/omnipath/local/R/4.2" "/usr/lib/R/library" 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cloud.r-project.org Bioconductor version 3.16 (BiocManager 1.30.18), R 4.2.1 (2022-06-23) Skipping 16 packages ahead of CRAN: GenomeInfoDbData, IRanges, S4Vectors, BiocGenerics, MatrixGenerics, zlibbioc, XVector, GenomeInfoDb, DelayedArray, Biobase, GenomicRanges, SummarizedExperiment, SingleCellExperiment, BiocStyle, viper, bcellViper [ Finished: 2022-10-15 20:12:23 CEST ]