[ Started: 2023-04-15 00:32:27 CEST ] [ dorothea v1.7.2 for BioC-3.17 from https://github.com/saezlab/dorothea@master ] [1] "Libraries: " "/home/omnipath/local/R/4.3-3.17" [3] "/home/omnipath/local/R/4.3" "/opt/R-beta/lib/R/library" Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib: cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES' Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib: cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES' Bioconductor version 3.17 (BiocManager 1.30.20), R 4.3.0 beta (2023-04-08 r84203) Bioconductor version 3.17 (BiocManager 1.30.20), R 4.3.0 beta (2023-04-08 r84203) Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' Skipping 17 packages not available: matrixStats, RCurl, BiocManager, yaml, rmarkdown, knitr, bookdown, e1071, mixtools, tidyr, tibble, testthat, Seurat, pkgdown, pheatmap, magrittr, dplyr [ Finished: 2023-04-15 00:32:32 CEST ]