[ Started: 2024-04-29 16:53:42 CEST ] [ dorothea v1.7.4 for BioC-3.19 from https://github.com/saezlab/dorothea@master (1461fb7 2024-02-24 12:55:48) ] [1] "Libraries: " "/home/omnipath/local/R/4.4-3.19" [3] "/home/omnipath/local/R/4.4" "/opt/R-alpha/lib/R/library" Warning message: package ‘remotes’ was built under R version 4.5.0 Warning message: package ‘BiocManager’ was built under R version 4.5.0 Bioconductor version 3.19 (BiocManager 1.30.22), R 4.4.0 alpha (2024-04-04 r86334) Bioconductor version 3.19 (BiocManager 1.30.22), R 4.4.0 alpha (2024-04-04 r86334) Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' Skipping 19 packages ahead of CRAN: zlibbioc, XVector, SparseArray, S4Arrays, IRanges, S4Vectors, MatrixGenerics, BiocGenerics, GenomeInfoDbData, GenomeInfoDb, DelayedArray, Biobase, GenomicRanges, SummarizedExperiment, SingleCellExperiment, viper, OmnipathR, BiocStyle, bcellViper [ Finished: 2024-04-29 16:53:49 CEST ]