[ Started: 2023-06-21 18:35:08 CEST ]
[ liana v0.1.12 for BioC-3.17 from https://github.com/saezlab/liana@master ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.3-3.17"
[3] "/home/omnipath/local/R/4.3"      "/opt/R-devel/lib/R/library"     
Bioconductor version 3.17 (BiocManager 1.30.21), R 4.3.0 (2023-04-21)
Bioconductor version 3.17 (BiocManager 1.30.21), R 4.3.0 (2023-04-21)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 
CellChat  (NA    -> 268b447d4...) [GitHub]
decoupleR (2.6.0 -> 500f73413...) [GitHub]
Downloading GitHub repo sqjin/CellChat@HEAD
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/CellChat-vignette.html: Wrote only 4096 of 10240 bytes
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/CellChat_analysis_of_spatial_imaging_data.Rmd: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/CellChat_analysis_of_spatial_imaging_data.html: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Comparison_analysis_of_multiple_datasets.Rmd: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Comparison_analysis_of_multiple_datasets.html: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Comparison_analysis_of_multiple_datasets_with_different_cellular_compositions.Rmd: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Comparison_analysis_of_multiple_datasets_with_different_cellular_compositions.html: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Interface_with_other_single-cell_analysis_toolkits.Rmd: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Interface_with_other_single-cell_analysis_toolkits.html: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Update-CellChatDB.Rmd: Cannot write: No space left on device
/usr/bin/tar: sqjin-CellChat-268b447/tutorial/Update-CellChatDB.html: Cannot write: No space left on device
/usr/bin/tar: Exiting with failure status due to previous errors
Error: Failed to install 'CellChat' from GitHub:
  Could not find tools necessary to compile a package
Call `pkgbuild::check_build_tools(debug = TRUE)` to diagnose the problem.
In addition: Warning message:
In utils::untar(tarfile, ...) :
  ‘/usr/bin/tar -xf '/tmp/RtmptrjZbK/file3701f234096f4.tar.gz' -C '/tmp/RtmptrjZbK/remotes3701f224187285'’ returned error code 2
Execution halted
[ Finished: 2023-06-21 18:35:18 CEST ]