[ Started: 2023-07-13 18:27:08 CEST ]
[ liana v0.1.12 for BioC-3.17 from https://github.com/saezlab/liana@master ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.3-3.17"
[3] "/home/omnipath/local/R/4.3"      "/opt/R-devel/lib/R/library"     
also installing the dependency ‘Matrix’

trying URL 'https://cran.uni-muenster.de/src/contrib/Matrix_1.6-0.tar.gz'
Content type 'application/x-gzip' length 2058479 bytes (2.0 MB)
==================================================
downloaded 2.0 MB

trying URL 'https://cran.uni-muenster.de/src/contrib/dbplyr_2.3.3.tar.gz'
Content type 'application/x-gzip' length 723072 bytes (706 KB)
==================================================
downloaded 706 KB

trying URL 'https://cran.uni-muenster.de/src/contrib/digest_0.6.33.tar.gz'
Content type 'application/x-gzip' length 177801 bytes (173 KB)
==================================================
downloaded 173 KB

trying URL 'https://cran.uni-muenster.de/src/contrib/MatrixModels_0.5-2.tar.gz'
Content type 'application/x-gzip' length 24659 bytes (24 KB)
==================================================
downloaded 24 KB

trying URL 'https://cran.uni-muenster.de/src/contrib/pkgload_1.3.2.1.tar.gz'
Content type 'application/x-gzip' length 76728 bytes (74 KB)
==================================================
downloaded 74 KB

trying URL 'https://cran.uni-muenster.de/src/contrib/pROC_1.18.4.tar.gz'
Content type 'application/x-gzip' length 439404 bytes (429 KB)
==================================================
downloaded 429 KB

trying URL 'https://cran.uni-muenster.de/src/contrib/Rcpp_1.0.11.tar.gz'
Content type 'application/x-gzip' length 2994004 bytes (2.9 MB)
==================================================
downloaded 2.9 MB

trying URL 'https://cran.uni-muenster.de/src/contrib/readxl_1.4.3.tar.gz'
Content type 'application/x-gzip' length 2093488 bytes (2.0 MB)
==========================================
downloaded 1.7 MB

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/readxl_1.4.3.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/readxl_1.4.3.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘readxl’ failed
trying URL 'https://cran.uni-muenster.de/src/contrib/rstudioapi_0.15.0.tar.gz'
Content type 'application/x-gzip' length 115689 bytes (112 KB)
===
downloaded 7949 bytes

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/rstudioapi_0.15.0.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/rstudioapi_0.15.0.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘rstudioapi’ failed
trying URL 'https://cran.uni-muenster.de/src/contrib/shiny_1.7.4.1.tar.gz'
Content type 'application/x-gzip' length 2476876 bytes (2.4 MB)

downloaded 7947 bytes

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/shiny_1.7.4.1.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/shiny_1.7.4.1.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘shiny’ failed
trying URL 'https://cran.uni-muenster.de/src/contrib/spatstat.geom_3.2-2.tar.gz'
Content type 'application/x-gzip' length 767955 bytes (749 KB)

downloaded 7949 bytes

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/spatstat.geom_3.2-2.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/spatstat.geom_3.2-2.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘spatstat.geom’ failed
trying URL 'https://cran.uni-muenster.de/src/contrib/testthat_3.1.10.tar.gz'
Content type 'application/x-gzip' length 737357 bytes (720 KB)

downloaded 7949 bytes

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/testthat_3.1.10.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/testthat_3.1.10.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘testthat’ failed
trying URL 'https://cran.uni-muenster.de/src/contrib/usethis_2.2.2.tar.gz'
Content type 'application/x-gzip' length 371065 bytes (362 KB)
=
downloaded 7949 bytes

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/usethis_2.2.2.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/usethis_2.2.2.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘usethis’ failed
trying URL 'https://cran.uni-muenster.de/src/contrib/xml2_1.3.5.tar.gz'
Content type 'application/x-gzip' length 272664 bytes (266 KB)
=
downloaded 7949 bytes

Error in download.file(url, destfile, method, mode = "wb", ...) : 
  download from 'https://cran.uni-muenster.de/src/contrib/xml2_1.3.5.tar.gz' failed
In addition: Warning messages:
1: In download.file(url, destfile, method, mode = "wb", ...) :
  downloaded length 0 != reported length 0
2: In download.file(url, destfile, method, mode = "wb", ...) :
  URL 'https://cran.uni-muenster.de/src/contrib/xml2_1.3.5.tar.gz': status was 'Failed writing received data to disk/application'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘xml2’ failed
Error in install.packages(update[instlib == l, "Package"], l, contriburl = contriburl,  : 
  unable to create temporary directory ‘/tmp/RtmpJ1MtzH/file185f6a7ea13700’
Calls: update.packages -> install.packages
In addition: Warning message:
In dir.create(tmpd2) :
  cannot create dir '/tmp/RtmpJ1MtzH/file185f6a7ea13700', reason 'No space left on device'
Execution halted
[ Finished: 2023-07-13 18:27:12 CEST ]