[ Started: 2023-10-21 16:32:19 CEST ]
[ liana v0.1.12 for BioC-3.18 from https://github.com/saezlab/liana@master ]
[1] "Libraries: " "/home/omnipath/local/R/4.3-3.18"
[3] "/home/omnipath/local/R/4.3" "/usr/lib/R/library"
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
CRAN: https://cloud.r-project.org
Bioconductor version 3.18 (BiocManager 1.30.22), R 4.3.1 (2023-06-16)
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
CRAN: https://cloud.r-project.org
Bioconductor version 3.18 (BiocManager 1.30.22), R 4.3.1 (2023-06-16)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
`force = TRUE` to re-install: 'BiocCheck'
CellChat (NA -> 418b660aa...) [GitHub]
OmnipathR (3.9.7 -> f72c23baa...) [GitHub]
decoupleR (2.7.0 -> dd9d47ea8...) [GitHub]
basilisk.... (NA -> 0a17046ab...) [GitHub]
basilisk (NA -> 8014ad726...) [GitHub]
interacti... (NA -> 1.38.0 ) [CRAN]
Annotatio... (NA -> 3.8.0 ) [CRAN]
xopen (NA -> 1.0.0 ) [CRAN]
ini (NA -> 0.3.1 ) [CRAN]
httr2 (NA -> 0.2.3 ) [CRAN]
gitcreds (NA -> 0.1.2 ) [CRAN]
zip (NA -> 2.3.0 ) [CRAN]
credentials (NA -> 2.0.1 ) [CRAN]
rstudioapi (NA -> 0.15.0 ) [CRAN]
gh (NA -> 1.4.0 ) [CRAN]
gert (NA -> 2.0.0 ) [CRAN]
forcats (NA -> 1.0.0 ) [CRAN]
uuid (NA -> 1.1-1 ) [CRAN]
ids (NA -> 1.0.1 ) [CRAN]
googledrive (NA -> 2.1.1 ) [CRAN]
gargle (NA -> 1.5.2 ) [CRAN]
dir.expiry (NA -> 1.8.0 ) [CRAN]
GlobalOpt... (NA -> 0.1.2 ) [CRAN]
vipor (NA -> 0.4.5 ) [CRAN]
beeswarm (NA -> 0.4.0 ) [CRAN]
ggbeeswarm (NA -> 0.7.2 ) [CRAN]
Cairo (NA -> 1.6-1 ) [CRAN]
assertthat (NA -> 0.2.1 ) [CRAN]
RcppHNSW (NA -> 0.5.0 ) [CRAN]
BiocNeigh... (NA -> 1.18.0 ) [CRAN]
locfit (NA -> 1.5-9.8 ) [CRAN]
Experimen... (NA -> 2.8.1 ) [CRAN]
urlchecker (NA -> 1.0.1 ) [CRAN]
rversions (NA -> 2.1.2 ) [CRAN]
rcmdcheck (NA -> 1.4.0 ) [CRAN]
profvis (NA -> 0.3.8 ) [CRAN]
usethis (NA -> 2.2.2 ) [CRAN]
reprex (NA -> 2.0.2 ) [CRAN]
modelr (NA -> 0.1.11 ) [CRAN]
haven (NA -> 2.5.3 ) [CRAN]
googleshe... (NA -> 1.1.1 ) [CRAN]
dtplyr (NA -> 1.3.1 ) [CRAN]
conflicted (NA -> 1.2.0 ) [CRAN]
doParallel (NA -> 1.0.17 ) [CRAN]
clue (NA -> 0.3-65 ) [CRAN]
GetoptLong (NA -> 1.0.5 ) [CRAN]
circlize (NA -> 0.4.15 ) [CRAN]
ggrastr (NA -> 1.0.2 ) [CRAN]
densvis (NA -> 1.10.3 ) [CRAN]
RcppML (NA -> 0.3.7 ) [CRAN]
viridis (NA -> 0.6.4 ) [CRAN]
scuttle (NA -> 1.10.3 ) [CRAN]
metapod (NA -> 1.8.0 ) [CRAN]
bluster (NA -> 1.10.0 ) [CRAN]
edgeR (NA -> 3.42.4 ) [CRAN]
muscData (NA -> 1.14.0 ) [CRAN]
devtools (NA -> 2.4.5 ) [CRAN]
tidyverse (NA -> 2.0.0 ) [CRAN]
furrr (NA -> 0.3.1 ) [CRAN]
entropy (NA -> 1.3.1 ) [CRAN]
markdown (NA -> 1.11 ) [CRAN]
ComplexHe... (NA -> 2.16.0 ) [CRAN]
scater (NA -> 1.28.0 ) [CRAN]
scran (NA -> 1.28.2 ) [CRAN]
Downloading GitHub repo sqjin/CellChat@HEAD
coda (NA -> 0.19-4 ) [CRAN]
network (NA -> 1.18.1 ) [CRAN]
statnet.c... (NA -> 4.9.0 ) [CRAN]
MatrixModels (NA -> 0.5-2 ) [CRAN]
SparseM (NA -> 1.81 ) [CRAN]
numDeriv (NA -> 2016.8-1.1) [CRAN]
nloptr (NA -> 2.0.3 ) [CRAN]
minqa (NA -> 1.2.6 ) [CRAN]
lme4 (NA -> 1.1-34 ) [CRAN]
quantreg (NA -> 5.97 ) [CRAN]
pbkrtest (NA -> 0.5.2 ) [CRAN]
carData (NA -> 3.0-5 ) [CRAN]
car (NA -> 3.1-2 ) [CRAN]
corrplot (NA -> 0.92 ) [CRAN]
sna (NA -> 2.7-1 ) [CRAN]
rstatix (NA -> 0.7.2 ) [CRAN]
polynom (NA -> 1.4-1 ) [CRAN]
ggsignif (NA -> 0.6.4 ) [CRAN]
ggsci (NA -> 3.0.0 ) [CRAN]
GlobalOpt... (NA -> 0.1.2 ) [CRAN]
doParallel (NA -> 1.0.17 ) [CRAN]
gridBase (NA -> 0.4-7 ) [CRAN]
rngtools (NA -> 1.5.2 ) [CRAN]
registry (NA -> 0.5-1 ) [CRAN]
ggnetwork (NA -> 0.5.12 ) [CRAN]
ggpubr (NA -> 0.6.0 ) [CRAN]
forcats (NA -> 1.0.0 ) [CRAN]
RSpectra (NA -> 0.16-1 ) [CRAN]
circlize (NA -> 0.4.15 ) [CRAN]
expm (NA -> 0.999-7 ) [CRAN]
svglite (NA -> 2.1.2 ) [CRAN]
ggalluvial (NA -> 0.12.5 ) [CRAN]
NMF (NA -> 0.26 ) [CRAN]
Skipping 4 packages not available: Biobase, BiocNeighbors, BiocGenerics, ComplexHeatmap
Installing 35 packages: coda, network, statnet.common, MatrixModels, SparseM, numDeriv, nloptr, minqa, lme4, quantreg, pbkrtest, carData, car, corrplot, sna, rstatix, polynom, ggsignif, ggsci, GlobalOptions, doParallel, gridBase, rngtools, registry, BiocNeighbors, ggnetwork, ggpubr, forcats, RSpectra, ComplexHeatmap, circlize, expm, svglite, ggalluvial, NMF
trying URL 'https://cran.uni-muenster.de/src/contrib/coda_0.19-4.tar.gz'
Content type 'application/x-gzip' length 74239 bytes (72 KB)
==================================================
downloaded 72 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/network_1.18.1.tar.gz'
Content type 'application/x-gzip' length 503993 bytes (492 KB)
==================================================
downloaded 492 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/statnet.common_4.9.0.tar.gz'
Content type 'application/x-gzip' length 339323 bytes (331 KB)
==================================================
downloaded 331 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/MatrixModels_0.5-2.tar.gz'
Content type 'application/x-gzip' length 24659 bytes (24 KB)
==================================================
downloaded 24 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/SparseM_1.81.tar.gz'
Content type 'application/x-gzip' length 735100 bytes (717 KB)
==================================================
downloaded 717 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/numDeriv_2016.8-1.1.tar.gz'
Content type 'application/x-gzip' length 76053 bytes (74 KB)
==================================================
downloaded 74 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/nloptr_2.0.3.tar.gz'
Content type 'application/x-gzip' length 2219877 bytes (2.1 MB)
==================================================
downloaded 2.1 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/minqa_1.2.6.tar.gz'
Content type 'application/x-gzip' length 54493 bytes (53 KB)
==================================================
downloaded 53 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/lme4_1.1-34.tar.gz'
Content type 'application/x-gzip' length 2948976 bytes (2.8 MB)
==================================================
downloaded 2.8 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/quantreg_5.97.tar.gz'
Content type 'application/x-gzip' length 1026052 bytes (1002 KB)
==================================================
downloaded 1002 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/pbkrtest_0.5.2.tar.gz'
Content type 'application/x-gzip' length 75295 bytes (73 KB)
==================================================
downloaded 73 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/carData_3.0-5.tar.gz'
Content type 'application/x-gzip' length 1004201 bytes (980 KB)
==================================================
downloaded 980 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/car_3.1-2.tar.gz'
Content type 'application/x-gzip' length 579829 bytes (566 KB)
==================================================
downloaded 566 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/corrplot_0.92.tar.gz'
Content type 'application/x-gzip' length 3765850 bytes (3.6 MB)
==================================================
downloaded 3.6 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/sna_2.7-1.tar.gz'
Content type 'application/x-gzip' length 302093 bytes (295 KB)
==================================================
downloaded 295 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/rstatix_0.7.2.tar.gz'
Content type 'application/x-gzip' length 405256 bytes (395 KB)
==================================================
downloaded 395 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/polynom_1.4-1.tar.gz'
Content type 'application/x-gzip' length 334803 bytes (326 KB)
==================================================
downloaded 326 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/ggsignif_0.6.4.tar.gz'
Content type 'application/x-gzip' length 587393 bytes (573 KB)
==================================================
downloaded 573 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/ggsci_3.0.0.tar.gz'
Content type 'application/x-gzip' length 2312683 bytes (2.2 MB)
==================================================
downloaded 2.2 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/GlobalOptions_0.1.2.tar.gz'
Content type 'application/x-gzip' length 305898 bytes (298 KB)
==================================================
downloaded 298 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/doParallel_1.0.17.tar.gz'
Content type 'application/x-gzip' length 164254 bytes (160 KB)
==================================================
downloaded 160 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/gridBase_0.4-7.tar.gz'
Content type 'application/x-gzip' length 153373 bytes (149 KB)
==================================================
downloaded 149 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/rngtools_1.5.2.tar.gz'
Content type 'application/x-gzip' length 22753 bytes (22 KB)
==================================================
downloaded 22 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/registry_0.5-1.tar.gz'
Content type 'application/x-gzip' length 170969 bytes (166 KB)
==================================================
downloaded 166 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/ggnetwork_0.5.12.tar.gz'
Content type 'application/x-gzip' length 2033772 bytes (1.9 MB)
==================================================
downloaded 1.9 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/ggpubr_0.6.0.tar.gz'
Content type 'application/x-gzip' length 1941659 bytes (1.9 MB)
==================================================
downloaded 1.9 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/forcats_1.0.0.tar.gz'
Content type 'application/x-gzip' length 294183 bytes (287 KB)
==================================================
downloaded 287 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/RSpectra_0.16-1.tar.gz'
Content type 'application/x-gzip' length 127048 bytes (124 KB)
==================================================
downloaded 124 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/circlize_0.4.15.tar.gz'
Content type 'application/x-gzip' length 2497140 bytes (2.4 MB)
==================================================
downloaded 2.4 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/expm_0.999-7.tar.gz'
Content type 'application/x-gzip' length 136826 bytes (133 KB)
==================================================
downloaded 133 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/svglite_2.1.2.tar.gz'
Content type 'application/x-gzip' length 124525 bytes (121 KB)
==================================================
downloaded 121 KB
trying URL 'https://cran.uni-muenster.de/src/contrib/ggalluvial_0.12.5.tar.gz'
Content type 'application/x-gzip' length 2850813 bytes (2.7 MB)
==================================================
downloaded 2.7 MB
trying URL 'https://cran.uni-muenster.de/src/contrib/NMF_0.26.tar.gz'
Content type 'application/x-gzip' length 1672812 bytes (1.6 MB)
==================================================
downloaded 1.6 MB
* installing *source* package ‘coda’ ...
** package ‘coda’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (coda)
* installing *source* package ‘MatrixModels’ ...
** package ‘MatrixModels’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MatrixModels)
* installing *source* package ‘SparseM’ ...
** package ‘SparseM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using Fortran compiler: ‘GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c bckslv.f -o bckslv.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c chol.f -o chol.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c chol2csr.f -o chol2csr.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c cholesky.f -o cholesky.o
cholesky.f:2948:72:
2948 | IF ( NODE ) 400, 900, 500
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
cholesky.f:2982:72:
2982 | IF ( RNODE ) 1100, 1800, 1200
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
cholesky.f:3299:72:
3299 | IF ( ENODE ) 400, 800, 500
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
cholesky.f:3356:72:
3356 | IF ( NODE ) 1000, 2100, 1100
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
cholesky.f:3430:72:
3430 | IF ( NODE ) 1700, 2000, 1800
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c csr.f -o csr.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c extract.f -o extract.o
gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c sparskit.f -o sparskit.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c subscr.f -o subscr.o
gcc -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -o SparseM.so bckslv.o chol.o chol2csr.o cholesky.o csr.o extract.o init.o sparskit.o subscr.o -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR
installing to /home/omnipath/local/R/4.3-3.18/00LOCK-SparseM/00new/SparseM/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for ‘diag’ from package ‘base’ in package ‘SparseM’
Creating a generic function for ‘diag<-’ from package ‘base’ in package ‘SparseM’
Creating a generic function for ‘norm’ from package ‘base’ in package ‘SparseM’
Creating a new generic function for ‘backsolve’ in package ‘SparseM’
Creating a generic function for ‘forwardsolve’ from package ‘base’ in package ‘SparseM’
Creating a generic function for ‘model.response’ from package ‘stats’ in package ‘SparseM’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SparseM)
* installing *source* package ‘numDeriv’ ...
** package ‘numDeriv’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (numDeriv)
* installing *source* package ‘nloptr’ ...
** package ‘nloptr’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether g++ -std=gnu++17 accepts -g... yes
checking for g++ -std=gnu++17 option to enable C++11 features... none needed
checking how to run the C++ preprocessor... g++ -std=gnu++17 -E
checking whether the compiler supports GNU C++... (cached) yes
checking whether g++ -std=gnu++17 accepts -g... (cached) yes
checking for g++ -std=gnu++17 option to enable C++11 features... (cached) none needed
checking for pkg-config... /usr/bin/pkg-config
checking if pkg-config knows NLopt... no
checking for cmake... no
------------------ CMAKE NOT FOUND --------------------
CMake was not found on the PATH. Please install CMake:
- sudo yum install cmake (Fedora/CentOS; inside a terminal)
- sudo apt install cmake (Debian/Ubuntu; inside a terminal).
- sudo pacman -S cmake (Arch Linux; inside a terminal).
- sudo brew install cmake (MacOS; inside a terminal with Homebrew)
- sudo port install cmake (MacOS; inside a terminal with MacPorts)
Alternatively install CMake from:
-------------------------------------------------------
ERROR: configuration failed for package ‘nloptr’
* removing ‘/home/omnipath/local/R/4.3-3.18/nloptr’
* installing *source* package ‘minqa’ ...
** package ‘minqa’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using Fortran compiler: ‘GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c altmov.f -o altmov.o
altmov.f:42:72:
42 | 10 HCOL(K)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
altmov.f:45:72:
45 | DO 20 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
altmov.f:46:72:
46 | 20 HCOL(K)=HCOL(K)+TEMP*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
altmov.f:53:72:
53 | 30 GLAG(I)=BMAT(KNEW,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
altmov.f:57:72:
57 | 40 TEMP=TEMP+XPT(K,J)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
altmov.f:59:72:
59 | DO 50 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 50 at (1)
altmov.f:60:72:
60 | 50 GLAG(I)=GLAG(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
altmov.f:76:72:
76 | 60 DISTSQ=DISTSQ+TEMP*TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
altmov.f:173:72:
173 | 90 XNEW(I)=DMAX1(SL(I),DMIN1(SU(I),TEMP))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
altmov.f:238:72:
238 | 140 GW=GW+GLAG(I)*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
altmov.f:249:72:
249 | 150 TEMP=TEMP+XPT(K,J)*W(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
altmov.f:250:72:
250 | 160 CURV=CURV+HCOL(K)*TEMP*TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
altmov.f:256:72:
256 | 170 XALT(I)=DMAX1(SL(I),DMIN1(SU(I),TEMP))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
altmov.f:269:72:
269 | 180 W(N+I)=XALT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
altmov.f:276:72:
276 | 190 XALT(I)=W(N+I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c bigden.f -o bigden.o
bigden.f:45:72:
45 | 10 W(N+K)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
bigden.f:49:72:
49 | DO 20 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
bigden.f:50:72:
50 | 20 W(N+K)=W(N+K)+TEMP*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
bigden.f:67:72:
67 | 30 XOPTSQ=XOPTSQ+XOPT(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
bigden.f:78:72:
78 | 40 SSTEMP=SSTEMP+DIFF*DIFF
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
bigden.f:88:72:
88 | 60 S(I)=XPT(KSAV,I)-XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
bigden.f:104:72:
104 | 80 XOPTS=XOPTS+XOPT(I)*S(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at (1)
bigden.f:116:72:
116 | 90 DEN(I)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
bigden.f:127:72:
127 | 100 TEMPC=TEMPC+XPT(K,I)*XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
bigden.f:132:72:
132 | 110 WVEC(K,5)=HALF*TEMPA*TEMPB
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
bigden.f:139:72:
139 | 120 WVEC(IP,5)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 120 at (1)
bigden.f:147:72:
147 | 130 PROD(K,JC)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
bigden.f:151:72:
151 | 140 SUM=SUM+ZMAT(K,J)*WVEC(K,JC)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
bigden.f:153:72:
153 | DO 150 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 150 at (1)
bigden.f:154:72:
154 | 150 PROD(K,JC)=PROD(K,JC)+SUM*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
bigden.f:159:72:
159 | 160 SUM=SUM+BMAT(K,J)*WVEC(NPT+J,JC)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
bigden.f:160:72:
160 | 170 PROD(K,JC)=PROD(K,JC)+SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
bigden.f:162:72:
162 | DO 190 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 190 at (1)
bigden.f:165:72:
165 | 180 SUM=SUM+BMAT(I,J)*WVEC(I,JC)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
bigden.f:166:72:
166 | 190 PROD(NPT+J,JC)=SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
bigden.f:174:72:
174 | 200 SUM=SUM+PAR(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
bigden.f:193:72:
193 | 210 DEN(9)=DEN(9)-HALF*TEMPA
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
bigden.f:200:72:
200 | 220 SUM=SUM+PAR(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1)
bigden.f:234:72:
234 | 230 PAR(J+1)=PAR(2)*PAR(J-1)+PAR(3)*PAR(J-2)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 230 at (1)
bigden.f:238:72:
238 | 240 SUM=SUM+DENEX(J)*PAR(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 240 at (1)
bigden.f:264:72:
264 | 260 PAR(J+1)=PAR(2)*PAR(J-1)+PAR(3)*PAR(J-2)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 260 at (1)
bigden.f:269:72:
269 | 270 DENMAX=DENMAX+DENEX(J)*PAR(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 270 at (1)
bigden.f:272:72:
272 | DO 280 J=1,5
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 280 at (1)
bigden.f:273:72:
273 | 280 VLAG(K)=VLAG(K)+PROD(K,J)*PAR(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 280 at (1)
bigden.f:283:72:
283 | 290 TEMPB=TEMPB+W(I)*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 290 at (1)
bigden.f:294:72:
294 | 300 S(I)=TAU*BMAT(KNEW,I)+ALPHA*TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
bigden.f:298:72:
298 | 310 SUM=SUM+XPT(K,J)*W(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 310 at (1)
bigden.f:300:72:
300 | DO 320 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 320 at (1)
bigden.f:301:72:
301 | 320 S(I)=S(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 320 at (1)
bigden.f:306:72:
306 | 330 DS=DS+D(I)*S(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 330 at (1)
bigden.f:314:72:
314 | DO 350 J=1,5
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 350 at (1)
bigden.f:315:72:
315 | 350 W(K)=W(K)+WVEC(K,J)*PAR(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 350 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c biglag.f -o biglag.o
biglag.f:38:72:
38 | 10 HCOL(K)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
biglag.f:42:72:
42 | DO 20 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
biglag.f:43:72:
43 | 20 HCOL(K)=HCOL(K)+TEMP*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
biglag.f:54:72:
54 | 30 DD=DD+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
biglag.f:60:72:
60 | 40 SUM=SUM+XPT(K,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
biglag.f:63:72:
63 | DO 50 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 50 at (1)
biglag.f:65:72:
65 | 50 GD(I)=GD(I)+SUM*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
biglag.f:76:72:
76 | 60 DHD=DHD+D(I)*GD(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
biglag.f:86:72:
86 | 70 S(I)=GC(I)+TEMP*GD(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 70 at (1)
biglag.f:99:72:
99 | 90 SS=SS+S(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
biglag.f:105:72:
105 | 100 W(I)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
biglag.f:113:72:
113 | 110 SUM=SUM+XPT(K,J)*S(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
biglag.f:115:72:
115 | DO 120 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 120 at (1)
biglag.f:116:72:
116 | 120 W(I)=W(I)+SUM*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 120 at (1)
biglag.f:127:72:
127 | 130 CF5=CF5+S(I)*GD(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
biglag.f:151:72:
151 | 140 TAUOLD=TAU
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
biglag.f:170:72:
170 | 150 S(I)=GC(I)+GD(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c bobyqa.f -o bobyqa.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c bobyqb.f -o bobyqb.o
bobyqb.f:68:72:
68 | 10 XOPTSQ=XOPTSQ+XOPT(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
bobyqb.f:97:72:
97 | DO 30 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 30 at (1)
bobyqb.f:100:72:
100 | 30 GOPT(I)=GOPT(I)+HQ(IH)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
bobyqb.f:105:72:
105 | 40 TEMP=TEMP+XPT(K,J)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
bobyqb.f:107:72:
107 | DO 50 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 50 at (1)
bobyqb.f:108:72:
108 | 50 GOPT(I)=GOPT(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
bobyqb.f:145:72:
145 | 70 CURV=CURV+PQ(K)*XPT(K,J)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 70 at (1)
bobyqb.f:167:72:
167 | 100 SUM=SUM+XPT(K,I)*XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
bobyqb.f:170:72:
170 | DO 110 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 110 at (1)
bobyqb.f:174:72:
174 | DO 110 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 110 at (1)
bobyqb.f:175:72:
175 | 110 BMAT(IP,J)=BMAT(IP,J)+W(I)*VLAG(J)+VLAG(I)*W(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
bobyqb.f:185:72:
185 | 120 SUMW=SUMW+VLAG(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 120 at (1)
bobyqb.f:189:72:
189 | 130 SUM=SUM+VLAG(K)*XPT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
bobyqb.f:191:72:
191 | DO 140 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 140 at (1)
bobyqb.f:192:72:
192 | 140 BMAT(K,J)=BMAT(K,J)+SUM*ZMAT(K,JJ)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
bobyqb.f:193:72:
193 | DO 150 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 150 at (1)
bobyqb.f:196:72:
196 | DO 150 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 150 at (1)
bobyqb.f:197:72:
197 | 150 BMAT(IP,J)=BMAT(IP,J)+TEMP*W(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
bobyqb.f:207:72:
207 | 160 XPT(K,J)=XPT(K,J)-XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
bobyqb.f:208:72:
208 | DO 170 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 170 at (1)
bobyqb.f:211:72:
211 | 170 BMAT(NPT+I,J)=BMAT(NPT+J,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
bobyqb.f:217:72:
217 | 180 XOPT(I)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
bobyqb.f:246:72:
246 | 200 XOPTSQ=XOPTSQ+XOPT(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
bobyqb.f:278:72:
278 | 220 D(I)=XNEW(I)-XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1)
bobyqb.f:291:72:
291 | 240 SUM=SUM+BMAT(K,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 240 at (1)
bobyqb.f:294:72:
294 | 250 W(NPT+K)=SUMA
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 250 at (1)
bobyqb.f:299:72:
299 | 260 SUM=SUM+ZMAT(K,JJ)*W(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 260 at (1)
bobyqb.f:301:72:
301 | DO 270 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 270 at (1)
bobyqb.f:302:72:
302 | 270 VLAG(K)=VLAG(K)+SUM*ZMAT(K,JJ)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 270 at (1)
bobyqb.f:310:72:
310 | 280 SUM=SUM+W(K)*BMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 280 at (1)
bobyqb.f:314:72:
314 | 290 SUM=SUM+BMAT(JP,I)*D(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 290 at (1)
bobyqb.f:317:72:
317 | 300 DX=DX+D(J)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
bobyqb.f:330:72:
330 | 310 D(I)=XNEW(I)-XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 310 at (1)
bobyqb.f:361:72:
361 | 330 HDIAG=HDIAG+ZMAT(K,JJ)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 330 at (1)
bobyqb.f:365:72:
365 | 340 DISTSQ=DISTSQ+(XPT(K,J)-XOPT(J))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 340 at (1)
bobyqb.f:428:72:
428 | DO 410 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 410 at (1)
bobyqb.f:432:72:
432 | 410 VQUAD=VQUAD+HQ(IH)*TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 410 at (1)
bobyqb.f:434:72:
434 | 420 VQUAD=VQUAD+HALF*PQ(K)*W(NPT+K)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 420 at (1)
bobyqb.f:476:72:
476 | 440 HDIAG=HDIAG+ZMAT(K,JJ)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 440 at (1)
bobyqb.f:480:72:
480 | 450 DISTSQ=DISTSQ+(XPT(K,J)-XNEW(J))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 450 at (1)
bobyqb.f:487:72:
487 | 460 BIGLSQ=DMAX1(BIGLSQ,TEMP*VLAG(K)**2)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 460 at (1)
bobyqb.f:504:72:
504 | DO 470 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 470 at (1)
bobyqb.f:506:72:
506 | 470 HQ(IH)=HQ(IH)+TEMP*XPT(KNEW,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 470 at (1)
bobyqb.f:509:72:
509 | DO 480 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 480 at (1)
bobyqb.f:510:72:
510 | 480 PQ(K)=PQ(K)+TEMP*ZMAT(K,JJ)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 480 at (1)
bobyqb.f:518:72:
518 | 490 W(I)=BMAT(KNEW,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 490 at (1)
bobyqb.f:522:72:
522 | 500 SUMA=SUMA+ZMAT(KNEW,JJ)*ZMAT(K,JJ)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 500 at (1)
bobyqb.f:525:72:
525 | 510 SUMB=SUMB+XPT(K,J)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 510 at (1)
bobyqb.f:527:72:
527 | DO 520 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 520 at (1)
bobyqb.f:528:72:
528 | 520 W(I)=W(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 520 at (1)
bobyqb.f:530:72:
530 | 530 GOPT(I)=GOPT(I)+DIFF*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 530 at (1)
bobyqb.f:541:72:
541 | DO 540 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 540 at (1)
bobyqb.f:544:72:
544 | 540 GOPT(I)=GOPT(I)+HQ(IH)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 540 at (1)
bobyqb.f:548:72:
548 | 550 TEMP=TEMP+XPT(K,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 550 at (1)
bobyqb.f:550:72:
550 | DO 560 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 560 at (1)
bobyqb.f:551:72:
551 | 560 GOPT(I)=GOPT(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 560 at (1)
bobyqb.f:561:72:
561 | 570 W(K)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 570 at (1)
bobyqb.f:565:72:
565 | 580 SUM=SUM+ZMAT(K,J)*VLAG(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 580 at (1)
bobyqb.f:566:72:
566 | DO 590 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 590 at (1)
bobyqb.f:567:72:
567 | 590 W(K)=W(K)+SUM*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 590 at (1)
bobyqb.f:571:72:
571 | 600 SUM=SUM+XPT(K,J)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 600 at (1)
bobyqb.f:573:72:
573 | 610 W(K)=SUM*W(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 610 at (1)
bobyqb.f:579:72:
579 | 620 SUM=SUM+BMAT(K,I)*VLAG(K)+XPT(K,I)*W(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 620 at (1)
bobyqb.f:590:72:
590 | 630 VLAG(NPT+I)=SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 630 at (1)
bobyqb.f:622:72:
622 | 660 SUM=SUM+(XPT(K,J)-XOPT(J))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 660 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c lagmax.f -o lagmax.o
lagmax.f:36:72:
36 | 10 SUM=SUM+H(I,J)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
lagmax.f:43:72:
43 | 30 V(J)=H(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
lagmax.f:56:72:
56 | 40 D(I)=D(I)+H(I,J)*V(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
lagmax.f:58:72:
58 | 50 DSQ=DSQ+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
lagmax.f:64:72:
64 | 60 WSQ=WSQ+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
lagmax.f:70:72:
70 | 70 TEMP=TEMP+H(I,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 70 at (1)
lagmax.f:72:72:
72 | 80 V(I)=RATIO*V(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at (1)
lagmax.f:78:72:
78 | 90 D(I)=VHW*V(I)+TEMP*D(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
lagmax.f:94:72:
94 | 100 SUM=SUM+H(I,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
lagmax.f:95:72:
95 | 110 DHD=DHD+SUM*D(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
lagmax.f:102:72:
102 | 120 D(I)=SCALE*D(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 120 at (1)
lagmax.f:122:72:
122 | 130 SUMV=SUMV+H(I,J)*V(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
lagmax.f:125:72:
125 | 140 VHV=VHV+SUMV*V(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
lagmax.f:147:72:
147 | 150 V(I)=TEMPC*V(I)-TEMPD*G(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
lagmax.f:168:72:
168 | 160 D(I)=TEMPD*D(I)+TEMPV*V(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I'/home/omnipath/local/R/4.3-3.18/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c minqa.cpp -o minqa.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c newuoa.f -o newuoa.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c newuob.f -o newuob.o
newuob.f:49:72:
49 | 10 XPT(K,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
newuob.f:50:72:
50 | DO 20 I=1,NDIM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
newuob.f:51:72:
51 | 20 BMAT(I,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
newuob.f:53:72:
53 | 30 HQ(IH)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
newuob.f:56:72:
56 | DO 40 J=1,NPTM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1)
newuob.f:57:72:
57 | 40 ZMAT(K,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
newuob.f:98:72:
98 | 60 X(J)=XPT(NF,J)+XBASE(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
newuob.f:159:72:
159 | 80 XOPTSQ=XOPTSQ+XOPT(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at (1)
newuob.f:170:72:
170 | 110 DSQ=DSQ+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
newuob.f:191:72:
191 | 130 SUM=SUM+XPT(K,I)*XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
newuob.f:195:72:
195 | DO 140 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 140 at (1)
newuob.f:201:72:
201 | DO 140 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 140 at (1)
newuob.f:202:72:
202 | 140 BMAT(IP,J)=BMAT(IP,J)+VLAG(I)*W(J)+W(I)*VLAG(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
newuob.f:210:72:
210 | 150 W(I)=W(NPT+I)*ZMAT(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
newuob.f:214:72:
214 | 160 SUM=SUM+W(I)*XPT(I,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
newuob.f:217:72:
217 | DO 170 I=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 170 at (1)
newuob.f:218:72:
218 | 170 BMAT(I,J)=BMAT(I,J)+SUM*ZMAT(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
newuob.f:219:72:
219 | DO 180 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 180 at (1)
newuob.f:223:72:
223 | DO 180 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 180 at (1)
newuob.f:224:72:
224 | 180 BMAT(IP,J)=BMAT(IP,J)+TEMP*VLAG(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
newuob.f:234:72:
234 | 190 XPT(K,J)=XPT(K,J)-HALF*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
newuob.f:235:72:
235 | DO 200 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1)
newuob.f:240:72:
240 | 200 BMAT(NPT+I,J)=BMAT(NPT+J,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
newuob.f:243:72:
243 | 210 XOPT(J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
newuob.f:266:72:
266 | 220 SUM=SUM+BMAT(K,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1)
newuob.f:268:72:
268 | 230 VLAG(K)=SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 230 at (1)
newuob.f:273:72:
273 | 240 SUM=SUM+ZMAT(I,K)*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 240 at (1)
newuob.f:280:72:
280 | DO 250 I=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 250 at (1)
newuob.f:281:72:
281 | 250 VLAG(I)=VLAG(I)+SUM*ZMAT(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 250 at (1)
newuob.f:287:72:
287 | 260 SUM=SUM+W(I)*BMAT(I,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 260 at (1)
newuob.f:291:72:
291 | 270 SUM=SUM+BMAT(JP,K)*D(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 270 at (1)
newuob.f:294:72:
294 | 280 DX=DX+D(J)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 280 at (1)
newuob.f:314:72:
314 | 300 X(I)=XBASE(I)+XNEW(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
newuob.f:343:72:
343 | DO 340 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 340 at (1)
newuob.f:347:72:
347 | 340 VQUAD=VQUAD+TEMP*HQ(IH)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 340 at (1)
newuob.f:349:72:
349 | 350 VQUAD=VQUAD+PQ(K)*W(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 350 at (1)
newuob.f:366:72:
366 | 360 XOPTSQ=XOPTSQ+XOPT(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 360 at (1)
newuob.f:405:72:
405 | 380 HDIAG=HDIAG+TEMP*ZMAT(K,J)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 380 at (1)
newuob.f:409:72:
409 | 390 DISTSQ=DISTSQ+(XPT(K,J)-XOPT(J))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 390 at (1)
newuob.f:427:72:
427 | DO 420 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 420 at (1)
newuob.f:429:72:
429 | 420 HQ(IH)=HQ(IH)+TEMP*XPT(KNEW,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 420 at (1)
newuob.f:438:72:
438 | DO 440 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 440 at (1)
newuob.f:439:72:
439 | 440 PQ(K)=PQ(K)+TEMP*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 440 at (1)
newuob.f:444:72:
444 | 450 XPT(KNEW,I)=XNEW(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 450 at (1)
newuob.f:455:72:
455 | 700 VLAG(K)=FVAL(K)-FVAL(KOPT)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 700 at (1)
newuob.f:460:72:
460 | 710 SUM=SUM+BMAT(K,I)*VLAG(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 710 at (1)
newuob.f:462:72:
462 | 720 W(I)=SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 720 at (1)
newuob.f:471:72:
471 | 730 GQ(I)=W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 730 at (1)
newuob.f:473:72:
473 | 740 HQ(IH)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 740 at (1)
newuob.f:477:72:
477 | 750 W(J)=W(J)+VLAG(K)*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 750 at (1)
newuob.f:478:72:
478 | 760 IF (J .LT. IDZ) W(J)=-W(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 760 at (1)
newuob.f:481:72:
481 | DO 770 J=1,NPTM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 770 at (1)
newuob.f:482:72:
482 | 770 PQ(K)=PQ(K)+ZMAT(K,J)*W(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 770 at (1)
newuob.f:504:72:
504 | 470 SUM=SUM+(XPT(K,J)-XOPT(J))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 470 at (1)
newuob.f:556:72:
556 | 540 X(I)=XBASE(I)+XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 540 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c prelim.f -o prelim.o
prelim.f:39:72:
39 | 10 XPT(K,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
prelim.f:40:72:
40 | DO 20 I=1,NDIM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
prelim.f:41:72:
41 | 20 BMAT(I,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
prelim.f:43:72:
43 | 30 HQ(IH)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
prelim.f:46:72:
46 | DO 40 J=1,NPT-NP
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1)
prelim.f:47:72:
47 | 40 ZMAT(K,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c rescue.f -o rescue.o
rescue.f:66:72:
66 | 10 DISTSQ=DISTSQ+XPT(K,J)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
rescue.f:70:72:
70 | DO 20 J=1,NPTM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
rescue.f:71:72:
71 | 20 ZMAT(K,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
rescue.f:80:72:
80 | 30 W(J)=W(J)+PQ(K)*XPT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
rescue.f:81:72:
81 | DO 40 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 40 at (1)
rescue.f:83:72:
83 | 40 HQ(IH)=HQ(IH)+W(I)*XOPT(J)+W(J)*XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
rescue.f:103:72:
103 | DO 50 I=1,NDIM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 50 at (1)
rescue.f:104:72:
104 | 50 BMAT(I,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
rescue.f:145:72:
145 | 70 ZMAT(K,K-NP)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 70 at (1)
rescue.f:157:72:
157 | 90 BMAT(KNEW,J)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
rescue.f:161:72:
161 | 100 ZMAT(KNEW,J)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
rescue.f:180:72:
180 | 110 W(NDIM+K)=DABS(W(NDIM+K))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
rescue.f:201:72:
201 | 140 W(NPT+J)=XPT(KNEW,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
rescue.f:208:72:
208 | 150 SUM=SUM+W(NPT+J)*XPT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
rescue.f:219:72:
219 | 160 W(K)=HALF*SUM*SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
rescue.f:227:72:
227 | 170 SUM=SUM+BMAT(K,J)*W(NPT+J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
rescue.f:228:72:
228 | 180 VLAG(K)=SUM
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
rescue.f:233:72:
233 | 190 SUM=SUM+ZMAT(K,J)*W(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
rescue.f:235:72:
235 | DO 200 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1)
rescue.f:236:72:
236 | 200 VLAG(K)=VLAG(K)+SUM*ZMAT(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
rescue.f:242:72:
242 | 210 SUM=SUM+BMAT(K,J)*W(K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
rescue.f:246:72:
246 | 220 SUM=SUM+BMAT(IP,J)*W(IP)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1)
rescue.f:249:72:
249 | 230 DISTSQ=DISTSQ+XPT(KNEW,J)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 230 at (1)
rescue.f:264:72:
264 | 240 HDIAG=HDIAG+ZMAT(K,J)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 240 at (1)
rescue.f:271:72:
271 | 250 VLMXSQ=DMAX1(VLMXSQ,VLAG(K)**2)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 250 at (1)
rescue.f:297:72:
297 | DO 270 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 270 at (1)
rescue.f:299:72:
299 | 270 HQ(IH)=HQ(IH)+TEMP*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 270 at (1)
rescue.f:332:72:
332 | 280 VQUAD=VQUAD+HALF*PQ(K)*TEMP*TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 280 at (1)
rescue.f:359:72:
359 | 310 GOPT(I)=GOPT(I)+DIFF*BMAT(KPT,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 310 at (1)
rescue.f:363:72:
363 | 320 SUM=SUM+ZMAT(K,J)*ZMAT(KPT,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 320 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c trsapp.f -o trsapp.o
trsapp.f:33:72:
33 | 10 D(I)=XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
trsapp.f:45:72:
45 | 30 DD=DD+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
trsapp.f:61:72:
61 | 60 DHD=DHD+D(J)*HD(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
trsapp.f:82:72:
82 | 70 GG=GG+(G(I)+HS(I))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 70 at (1)
trsapp.f:98:72:
98 | 80 SS=SS+STEP(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at (1)
trsapp.f:112:72:
112 | 100 SHS=SHS+STEP(I)*HS(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
trsapp.f:125:72:
125 | 110 D(I)=TEMPA*(G(I)+HS(I))-TEMPB*STEP(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
trsapp.f:133:72:
133 | 130 DHS=DHS+HD(I)*STEP(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
trsapp.f:156:72:
156 | 140 QSAV=QNEW
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 140 at (1)
trsapp.f:176:72:
176 | 150 GG=GG+(G(I)+HS(I))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
trsapp.f:188:72:
188 | 180 HD(I)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
trsapp.f:192:72:
192 | 190 TEMP=TEMP+XPT(K,J)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
trsapp.f:194:72:
194 | DO 200 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1)
trsapp.f:195:72:
195 | 200 HD(I)=HD(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
trsapp.f:198:72:
198 | DO 210 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 210 at (1)
trsapp.f:201:72:
201 | 210 HD(I)=HD(I)+HQ(IH)*D(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c trsbox.f -o trsbox.o
trsbox.f:71:72:
71 | 10 GNEW(I)=GOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
trsbox.f:92:72:
92 | 40 STEPSQ=STEPSQ+S(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
trsbox.f:163:72:
163 | 80 D(I)=D(I)+STPLEN*S(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at (1)
trsbox.f:304:72:
304 | 170 REDSAV=REDNEW
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
trsbox.f:333:72:
333 | 180 HRED(I)=CTH*HRED(I)+STH*HS(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
trsbox.f:351:72:
351 | 200 DSQ=DSQ+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
trsbox.f:362:72:
362 | DO 220 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 220 at (1)
trsbox.f:365:72:
365 | 220 HS(I)=HS(I)+HQ(IH)*S(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1)
trsbox.f:370:72:
370 | 230 TEMP=TEMP+XPT(K,J)*S(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 230 at (1)
trsbox.f:373:72:
373 | 240 HS(I)=HS(I)+TEMP*XPT(K,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 240 at (1)
trsbox.f:379:72:
379 | 260 HRED(I)=HS(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 260 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c trstep.f -o trstep.o
trstep.f:41:72:
41 | DO 10 J=1,I
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
trstep.f:42:72:
42 | 10 H(I,J)=H(J,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
trstep.f:55:72:
55 | 20 SUM=SUM+H(I,K)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
trstep.f:68:72:
68 | 30 Z(I)=TD(I)*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
trstep.f:74:72:
74 | 40 Z(J)=Z(J)+H(I,J)*W(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
trstep.f:75:72:
75 | 50 WZ=WZ+W(J)*Z(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
trstep.f:82:72:
82 | 60 H(I,J)=H(I,J)-W(I)*Z(J)-W(J)*(Z(I)-WZ*W(I))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
trstep.f:93:72:
93 | 90 GSQ=GSQ+G(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
trstep.f:99:72:
99 | 100 SUM=SUM+GG(I)*H(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
trstep.f:100:72:
100 | DO 110 I=KP,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 110 at (1)
trstep.f:101:72:
101 | 110 GG(I)=GG(I)-SUM*H(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
trstep.f:112:72:
112 | 120 TDMIN=DMIN1(TDMIN,TD(I))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 120 at (1)
trstep.f:117:72:
117 | 130 D(I)=-SCALE*GG(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 130 at (1)
trstep.f:187:72:
187 | 180 D(I)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
trstep.f:200:72:
200 | 200 DTG=DTG+D(I)*GG(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
trstep.f:203:72:
203 | 210 D(I)=SCALE*D(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
trstep.f:222:72:
222 | 240 W(I)=(-GG(I)-TN(I-1)*W(I-1))/PIV(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 240 at (1)
trstep.f:225:72:
225 | 250 D(I)=W(I)-TN(I)*D(I+1)/PIV(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 250 at (1)
trstep.f:233:72:
233 | 260 WSQ=WSQ+PIV(I)*W(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 260 at (1)
trstep.f:244:72:
244 | 270 D(I)=SCALE*D(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 270 at (1)
trstep.f:276:72:
276 | 280 W(I)=(DSIGN(ONE,TEMP)+TEMP)/PIV(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 280 at (1)
trstep.f:279:72:
279 | 290 Z(I)=W(I)-TN(I)*Z(I+1)/PIV(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 290 at (1)
trstep.f:286:72:
286 | 300 DTZ=DTZ+D(I)*Z(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
trstep.f:296:72:
296 | 310 D(I)=D(I)+GAM*Z(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 310 at (1)
trstep.f:327:72:
327 | 330 SHFMAX=DMIN1(SHFMAX,PIVOT)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 330 at (1)
trstep.f:371:72:
371 | 380 SUM=SUM+D(I)*H(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 380 at (1)
trstep.f:372:72:
372 | DO 390 I=KP,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 390 at (1)
trstep.f:373:72:
373 | 390 D(I)=D(I)-SUM*H(I,K)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 390 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c uobyqa.f -o uobyqa.o
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c uobyqb.f -o uobyqb.o
uobyqb.f:49:72:
49 | DO 10 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
uobyqb.f:50:72:
50 | 10 XPT(K,I)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
uobyqb.f:52:72:
52 | DO 20 J=1,NPTM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
uobyqb.f:53:72:
53 | 20 PL(K,J)=ZERO
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
uobyqb.f:61:72:
61 | 40 X(I)=XBASE(I)+XPT(NF+1,I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
uobyqb.f:173:72:
173 | DO 80 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 80 at (1)
uobyqb.f:177:72:
177 | 80 H(I,J)=PQ(IH)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at (1)
uobyqb.f:187:72:
187 | 90 TEMP=TEMP+D(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
uobyqb.f:201:72:
201 | 110 X(I)=XBASE(I)+XNEW(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 110 at (1)
uobyqb.f:230:72:
230 | DO 150 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 150 at (1)
uobyqb.f:234:72:
234 | 150 VQUAD=VQUAD+W(IH)*PQ(IH)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 150 at (1)
uobyqb.f:238:72:
238 | 160 TEMP=TEMP+W(J)*PL(K,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 160 at (1)
uobyqb.f:239:72:
239 | 170 VLAG(K)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 170 at (1)
uobyqb.f:250:72:
250 | 180 TEMP=TEMP+(XPT(K,I)-XNEW(I))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 180 at (1)
uobyqb.f:252:72:
252 | 190 SUM=SUM+DABS(TEMP*TEMP*TEMP*VLAG(K))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
uobyqb.f:262:72:
262 | 200 XOPT(I)=XNEW(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
uobyqb.f:298:72:
298 | 220 SUM=SUM+(XPT(K,I)-XOPT(I))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1)
uobyqb.f:313:72:
313 | 250 XPT(KNEW,I)=XNEW(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 250 at (1)
uobyqb.f:317:72:
317 | 260 PQ(J)=PQ(J)+DIFF*PL(KNEW,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 260 at (1)
uobyqb.f:322:72:
322 | 270 PL(K,J)=PL(K,J)-TEMP*PL(KNEW,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 270 at (1)
uobyqb.f:343:72:
343 | DO 300 I=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 300 at (1)
uobyqb.f:344:72:
344 | 300 W(K)=W(K)+(XPT(K,I)-XOPT(I))**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
uobyqb.f:371:72:
371 | 330 H(I,J)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 330 at (1)
uobyqb.f:372:72:
372 | 340 SUMH=SUMH+HALF*TEMP*TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 340 at (1)
uobyqb.f:382:72:
382 | 350 SUMG=SUMG+G(I)**2
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 350 at (1)
uobyqb.f:409:72:
409 | 360 XPT(K,J)=XPT(K,J)-XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 360 at (1)
uobyqb.f:410:72:
410 | DO 380 I=1,J
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 380 at (1)
uobyqb.f:416:72:
416 | 370 PL(K,J)=PL(K,J)+PL(K,IH)*XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 370 at (1)
uobyqb.f:418:72:
418 | DO 380 K=1,NPT
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 380 at (1)
uobyqb.f:419:72:
419 | 380 PL(K,I)=PL(K,I)+PL(K,IH)*XOPT(J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 380 at (1)
uobyqb.f:453:72:
453 | 430 X(I)=XBASE(I)+XOPT(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 430 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c update.f -o update.o
update.f:30:72:
30 | 10 ZMAT(I,JL)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
update.f:61:72:
61 | 40 ZMAT(I,1)=TEMPA*ZMAT(I,1)-TEMPB*VLAG(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
update.f:79:72:
79 | 50 ZMAT(I,JB)=SCALB*(ZMAT(I,JB)-TEMPA*W(I)-TEMPB*VLAG(I))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
update.f:94:72:
94 | 60 ZMAT(I,IDZ)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at (1)
update.f:104:72:
104 | DO 70 I=1,JP
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 70 at (1)
gfortran -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -c updatebobyqa.f -o updatebobyqa.o
updatebobyqa.f:22:72:
22 | DO 10 J=1,NPTM
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
updatebobyqa.f:23:72:
23 | 10 ZTEST=DMAX1(ZTEST,DABS(ZMAT(K,J)))
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
updatebobyqa.f:37:72:
37 | 20 ZMAT(I,1)=TEMP
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
updatebobyqa.f:58:72:
58 | 50 ZMAT(I,1)=TEMPA*ZMAT(I,1)-TEMPB*VLAG(I)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
updatebobyqa.f:67:72:
67 | DO 60 I=1,JP
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 60 at (1)
g++ -std=gnu++17 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -flto=auto -ffat-lto-objects -flto=auto -Wl,-z,relro -o minqa.so altmov.o bigden.o biglag.o bobyqa.o bobyqb.o lagmax.o minqa.o newuoa.o newuob.o prelim.o rescue.o trsapp.o trsbox.o trstep.o uobyqa.o uobyqb.o update.o updatebobyqa.o -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR
installing to /home/omnipath/local/R/4.3-3.18/00LOCK-minqa/00new/minqa/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (minqa)
* installing *source* package ‘carData’ ...
** package ‘carData’ successfully unpacked and MD5 sums checked
** using staged installation
** data
*** moving datasets to lazyload DB
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (carData)
* installing *source* package ‘corrplot’ ...
** package ‘corrplot’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (corrplot)
* installing *source* package ‘polynom’ ...
** package ‘polynom’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (polynom)
* installing *source* package ‘ggsignif’ ...
** package ‘ggsignif’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ggsignif)
* installing *source* package ‘ggsci’ ...
** package ‘ggsci’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ggsci)
* installing *source* package ‘GlobalOptions’ ...
** package ‘GlobalOptions’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GlobalOptions)
* installing *source* package ‘doParallel’ ...
** package ‘doParallel’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (doParallel)
* installing *source* package ‘gridBase’ ...
** package ‘gridBase’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gridBase)
* installing *source* package ‘rngtools’ ...
** package ‘rngtools’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rngtools)
* installing *source* package ‘registry’ ...
** package ‘registry’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (registry)
* installing *source* package ‘forcats’ ...
** package ‘forcats’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (forcats)
* installing *source* package ‘RSpectra’ ...
** package ‘RSpectra’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -DUSE_FC_LEN_T -I../inst/include -I'/home/omnipath/local/R/4.3-3.18/Rcpp/include' -I'/home/omnipath/local/R/4.3-3.18/RcppEigen/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-MHXHhT/r-base-4.3.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c eigs_gen.cpp -o eigs_gen.o
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:397,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
60 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes]
163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
718 | struct palign_impl
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes]
741 | struct palign_impl
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
764 | struct palign_impl
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
778 | ptranspose(PacketBlock& kernel) {
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
783 | ptranspose(PacketBlock& kernel) {
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes]
790 | ptranspose(PacketBlock& kernel) {
| ^
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:377,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
15 | template<> struct conj_helper { \
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
22 | template<> struct conj_helper { \
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
15 | template<> struct conj_helper { \
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
22 | template<> struct conj_helper { \
| ^
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:370,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper::type>::type type;
| ^~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:439,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:370,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper::type>::type type;
| ^~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:439,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/SparseCore:37,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Sparse:26,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:31,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:370,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__m128i’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper::type>::type type;
| ^~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:439,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:370,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map >’
../inst/include/RMatOp/MatProd_sparseMatrix.h:36:10: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper::type>::type type;
| ^~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:439,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map >’
../inst/include/RMatOp/MatProd_sparseMatrix.h:36:10: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase >, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’
../inst/include/RMatOp/MatProd_sparseMatrix.h:36:10: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/SparseCore:37,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Sparse:26,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:31,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase > >’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase >, 0>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase >, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map >’
../inst/include/RMatOp/SparseMatrixMapping.h:25:103: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
47 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:370,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase >, 0>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase >, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map >’
../inst/include/RMatOp/SparseMatrixMapping.h:25:103: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__m128i’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
205 | typedef typename find_best_packet_helper::type>::type type;
| ^~~~
In file included from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Core:439,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/Dense:1,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigenForward.h:30,
from /home/omnipath/local/R/4.3-3.18/RcppEigen/include/RcppEigen.h:25,
from eigs_gen.cpp:1:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from ‘class Eigen::SparseMapBase >, 0>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase >, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map >’
../inst/include/RMatOp/SparseMatrixMapping.h:25:103: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes]
55 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map >’
../inst/include/RMatOp/RealShift_matrix.h:16:17: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’
../inst/include/RMatOp/RealShift_matrix.h:16:17: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’
../inst/include/RMatOp/RealShift_matrix.h:31:54: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >’
../inst/include/RMatOp/RealShift_matrix.h:31:59: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>’
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > >’
../inst/include/RMatOp/RealShift_matrix.h:31:59: required from here
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes]
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >, 0>’:
/home/omnipath/local/R/4.3-3.18/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix