[ Started: 2023-03-30 13:15:10 CEST ]
[ mistyR v1.7.2 for BioC-3.17 from https://github.com/saezlab/mistyR@devel ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.3-3.17"
[3] "/home/omnipath/local/R/4.3"      "/opt/R-devel/lib/R/library"     
Bioconductor version 3.17 (BiocManager 1.30.20), R Under development (unstable)
  (2023-03-16 r83996)
Old packages: 'decoupleR', 'hardhat'
trying URL 'https://bioconductor.org/packages/3.17/bioc/src/contrib/decoupleR_2.5.0.tar.gz'
Content type 'application/x-gzip' length 4316678 bytes (4.1 MB)
==================================================
downloaded 4.1 MB

trying URL 'https://cloud.r-project.org/src/contrib/hardhat_1.3.0.tar.gz'
Content type 'application/x-gzip' length 872416 bytes (851 KB)
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downloaded 851 KB

* installing *source* package ‘decoupleR’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (decoupleR)
* installing *source* package ‘hardhat’ ...
** package ‘hardhat’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hardhat)

The downloaded source packages are in
	‘/tmp/RtmpmlMErH/downloaded_packages’
Bioconductor version 3.17 (BiocManager 1.30.20), R Under development (unstable)
  (2023-03-16 r83996)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

Skipping 1 packages ahead of CRAN: hardhat
[ Finished: 2023-03-30 13:15:26 CEST ]