[ Started: 2023-04-07 19:08:44 CEST ]
[ mistyR v1.7.2 for BioC-3.17 from https://github.com/saezlab/mistyR@devel ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.3-3.17"
[3] "/home/omnipath/local/R/4.3"      "/opt/R-devel/lib/R/library"     
Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib:
  cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES'
Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib:
  cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES'
Bioconductor version 3.17 (BiocManager 1.30.20), R Under development (unstable)
  (2023-03-16 r83996)
Old packages: 'decoupleR'
trying URL 'https://bioconductor.org/packages/3.17/bioc/src/contrib/decoupleR_2.5.0.tar.gz'
Content type 'application/x-gzip' length 4316678 bytes (4.1 MB)
==================================================
downloaded 4.1 MB

* installing *source* package ‘decoupleR’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (decoupleR)

The downloaded source packages are in
	‘/tmp/Rtmp3YqvlP/downloaded_packages’
Bioconductor version 3.17 (BiocManager 1.30.20), R Under development (unstable)
  (2023-03-16 r83996)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

Skipping 35 packages not available: BiocManager, yaml, rmarkdown, knitr, bookdown, xgboost, testthat, RSNNS, kernlab, iml, igraph, future, earth, covr, withr, tidyselect, tidyr, tibble, stringr, R.utils, rlist, rlang, ridge, readr, ranger, purrr, ggplot2, furrr, filelock, dplyr, distances, digest, deldir, caret, assertthat
[ Finished: 2023-04-07 19:08:54 CEST ]