[ Started: 2023-04-23 00:54:05 CEST ] [ mistyR v1.7.2 for BioC-3.17 from https://github.com/saezlab/mistyR@devel ] [1] "Libraries: " "/home/omnipath/local/R/4.3-3.17" [3] "/home/omnipath/local/R/4.3" "/opt/R-devel/lib/R/library" Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib: cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES' Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib: cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES' Bioconductor version 3.17 (BiocManager 1.30.20), R 4.3.0 (2023-04-21) Bioconductor version 3.17 (BiocManager 1.30.20), R 4.3.0 (2023-04-21) Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' Skipping 35 packages not available: BiocManager, yaml, rmarkdown, knitr, bookdown, xgboost, testthat, RSNNS, kernlab, iml, igraph, future, earth, covr, withr, tidyselect, tidyr, tibble, stringr, R.utils, rlist, rlang, ridge, readr, ranger, purrr, ggplot2, furrr, filelock, dplyr, distances, digest, deldir, caret, assertthat [ Finished: 2023-04-23 00:54:10 CEST ]