[ Started: 2022-10-17 20:36:42 CEST ] [ OmnipathR v3.5.22 for BioC-3.16 from https://github.com/saezlab/OmnipathR@master ] [1] "Libraries: " "/home/omnipath/local/R/4.2-3.16" [3] "/home/omnipath/local/R/4.2" "/usr/lib/R/library" 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cloud.r-project.org Bioconductor version 3.16 (BiocManager 1.30.18), R 4.2.1 (2022-06-23) Skipping 19 packages ahead of CRAN: data.table, openssl, BiocGenerics, graph, zlibbioc, GenomeInfoDbData, GenomeInfoDb, XVector, Biostrings, KEGGREST, S4Vectors, IRanges, Biobase, Rgraphviz, supraHex, BiocFileCache, AnnotationDbi, biomaRt, BiocStyle [ Finished: 2022-10-17 20:36:49 CEST ]