[ Started: 2023-04-19 01:27:49 CEST ]
[ OmnipathR v3.6.6 for BioC-3.16 from https://github.com/saezlab/OmnipathR@RELEASE_3_16 ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.2-3.16"
[3] "/home/omnipath/local/R/4.2"      "/usr/lib/R/library"             
Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib:
  cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES'
Warning: unable to access index for repository https://cran.uni-muenster.de/src/contrib:
  cannot open URL 'https://cran.uni-muenster.de/src/contrib/PACKAGES'
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://cloud.r-project.org
Bioconductor version 3.16 (BiocManager 1.30.20), R 4.2.3 (2023-03-15)
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://cloud.r-project.org
Bioconductor version 3.16 (BiocManager 1.30.20), R 4.2.3 (2023-03-15)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

Skipping 47 packages not available: httr, curl, filelock, rappdirs, DBI, RSQLite, dplyr, dbplyr, RCurl, crayon, png, igraph, magrittr, purrr, stringr, tidyr, tibble, readr, ape, hexbin, xml2, digest, progress, XML, BiocManager, yaml, rmarkdown, knitr, bookdown, testthat, smoof, ParamHelpers, parallelMap, mlrMBO, gprofiler2, ggraph, ggplot2, dnet, withr, tidyselect, rvest, rlang, readxl, logger, later, jsonlite, checkmate
[ Finished: 2023-04-19 01:27:57 CEST ]