[ Started: 2023-05-06 00:56:20 CEST ]
[ OmnipathR v3.9.2 for BioC-3.17 from https://github.com/saezlab/OmnipathR@master ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.3-3.17"
[3] "/home/omnipath/local/R/4.3"      "/opt/R-devel/lib/R/library"     
Bioconductor version 3.17 (BiocManager 1.30.20), R 4.3.0 (2023-04-21)
Bioconductor version 3.17 (BiocManager 1.30.20), R 4.3.0 (2023-04-21)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 
sigmajs (NA -> 0.1.5) [CRAN]
Skipping 2 packages ahead of CRAN: sass, testthat
Installing 1 packages: sigmajs
trying URL 'https://cran.uni-muenster.de/src/contrib/sigmajs_0.1.5.tar.gz'
Content type 'application/x-gzip' length 294504 bytes (287 KB)
==================================================
downloaded 287 KB

* installing *source* package ‘sigmajs’ ...
** package ‘sigmajs’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sigmajs)

The downloaded source packages are in
	‘/tmp/Rtmp5DMwoM/downloaded_packages’
[ Finished: 2023-05-06 00:56:29 CEST ]