[ Started: 2024-01-10 13:36:16 CET ]
[ OmnipathR v3.11.1 for BioC-3.18 from https://github.com/saezlab/OmnipathR@master ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.3-3.18"
[3] "/home/omnipath/local/R/4.3"      "/usr/lib/R/library"             
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://cloud.r-project.org
Bioconductor version 3.18 (BiocManager 1.30.22), R 4.3.1 (2023-06-16)
Old packages: 'BH'
trying URL 'https://cloud.r-project.org/src/contrib/BH_1.84.0-0.tar.gz'
Content type 'application/x-gzip' length 14017751 bytes (13.4 MB)
==================================================
downloaded 13.4 MB

* installing *source* package ‘BH’ ...
** package ‘BH’ successfully unpacked and MD5 sums checked
** using staged installation
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BH)

The downloaded source packages are in
	‘/tmp/RtmpCyYG05/downloaded_packages’
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://cloud.r-project.org
Bioconductor version 3.18 (BiocManager 1.30.22), R 4.3.1 (2023-06-16)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

[ Finished: 2024-01-10 13:36:35 CET ]