[ Started: 2024-09-06 15:42:18 CEST ]
[ OmnipathR v3.12.3 for BioC-3.19 from https://git.bioconductor.org/packages/OmnipathR@RELEASE_3_19 (7085ced 2024-08-16 13:11:39) ]

[1] "Libraries: "                     "/home/omnipath/local/R/4.4-3.19"
[3] "/home/omnipath/local/R/4.4"      "/usr/lib/R/library"             
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://cloud.r-project.org
Bioconductor version 3.19 (BiocManager 1.30.25), R 4.4.1 (2024-06-14)
'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://cloud.r-project.org
Bioconductor version 3.19 (BiocManager 1.30.25), R 4.4.1 (2024-06-14)
Warning message:
package(s) not installed when version(s) same as or greater than current; use
  `force = TRUE` to re-install: 'BiocCheck' 

Skipping 5 packages ahead of CRAN: BiocGenerics, graph, supraHex, Rgraphviz, BiocStyle
[ Finished: 2024-09-06 15:42:27 CEST ]