[ Started: 2025-02-15 00:07:39 CET ] [ OmnipathR v3.15.9 for BioC-3.21 from https://github.com/saezlab/OmnipathR@devel (0a92537 2025-02-13 19:46:14) ] [1] "Libraries: " "/home/omnipath/local/R/4.5-3.21" [3] "/home/omnipath/local/R/4.5" "/opt/R-devel/lib/R/library" Bioconductor version 3.21 (BiocManager 1.30.25), R Under development (unstable) (2025-02-12 r87715) Old packages: 'CARNIVAL' trying URL 'https://bioconductor.org/packages/3.21/bioc/src/contrib/CARNIVAL_2.17.0.tar.gz' Content type 'application/x-gzip' length 2146243 bytes (2.0 MB) ================================================== downloaded 2.0 MB * installing *source* package ‘CARNIVAL’ ... ** this is package ‘CARNIVAL’ version ‘2.17.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CARNIVAL) The downloaded source packages are in ‘/tmp/RtmpqWufR2/downloaded_packages’ Bioconductor version 3.21 (BiocManager 1.30.25), R Under development (unstable) (2025-02-12 r87715) Warning message: package(s) not installed when version(s) same as or greater than current; use `force = TRUE` to re-install: 'BiocCheck' [ Finished: 2025-02-15 00:07:50 CET ]