[ Started: 2022-10-22 21:15:44 CEST ] [ progeny v1.17.3 for BioC-3.16 from https://github.com/saezlab/progeny@master ] [1] "Libraries: " "/home/omnipath/local/R/4.2-3.16" [3] "/home/omnipath/local/R/4.2" "/usr/lib/R/library" 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details replacement repositories: CRAN: https://cloud.r-project.org Bioconductor version 3.16 (BiocManager 1.30.18), R 4.2.1 (2022-06-23) Skipping 26 packages ahead of CRAN: zlibbioc, GenomeInfoDbData, GenomeInfoDb, XVector, Biostrings, KEGGREST, S4Vectors, IRanges, AnnotationDbi, annotate, BiocGenerics, Biobase, MatrixGenerics, DelayedArray, GenomicRanges, geneplotter, genefilter, BiocParallel, SummarizedExperiment, BiocFileCache, BiocStyle, DESeq2, SingleCellExperiment, biomaRt, airway, decoupleR [ Finished: 2022-10-22 21:15:51 CEST ]